Protein–RNA interactions for Protein: O54962

Banf1, Barrier-to-autointegration factor, mousemouse

Predictions only

Length 89 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Banf1O54962 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC22.5■■□□□ 1.19
Banf1O54962 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Banf1O54962 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Banf1O54962 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC22.5■■□□□ 1.19
Banf1O54962 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Banf1O54962 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Banf1O54962 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC22.49■■□□□ 1.19
Banf1O54962 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Banf1O54962 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC22.49■■□□□ 1.19
Banf1O54962 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
Banf1O54962 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
Banf1O54962 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Banf1O54962 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC22.48■■□□□ 1.19
Banf1O54962 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC22.48■■□□□ 1.19
Banf1O54962 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Banf1O54962 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Banf1O54962 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Banf1O54962 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC22.47■■□□□ 1.19
Banf1O54962 Gm45364-201ENSMUST00000210883 159 ntBASIC22.47■■□□□ 1.19
Banf1O54962 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Banf1O54962 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC22.46■■□□□ 1.19
Banf1O54962 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Banf1O54962 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Banf1O54962 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC22.46■■□□□ 1.19
Banf1O54962 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC22.45■■□□□ 1.19
Banf1O54962 Dmtn-209ENSMUST00000228295 2572 ntBASIC22.45■■□□□ 1.19
Banf1O54962 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC22.45■■□□□ 1.19
Banf1O54962 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC22.45■■□□□ 1.18
Banf1O54962 AC122317.2-201ENSMUST00000218708 1248 ntBASIC22.45■■□□□ 1.18
Banf1O54962 Gm9812-201ENSMUST00000061934 968 ntBASIC22.45■■□□□ 1.18
Banf1O54962 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
Banf1O54962 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Banf1O54962 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC22.44■■□□□ 1.18
Banf1O54962 Mir3960-201ENSMUST00000198213 73 ntBASIC22.44■■□□□ 1.18
Banf1O54962 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC22.44■■□□□ 1.18
Banf1O54962 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Banf1O54962 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Banf1O54962 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC22.43■■□□□ 1.18
Banf1O54962 Gm26766-202ENSMUST00000227544 2347 ntBASIC22.43■■□□□ 1.18
Banf1O54962 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Banf1O54962 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
Banf1O54962 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Banf1O54962 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Banf1O54962 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC22.42■■□□□ 1.18
Banf1O54962 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC22.42■■□□□ 1.18
Banf1O54962 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Banf1O54962 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Banf1O54962 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC22.42■■□□□ 1.18
Banf1O54962 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Banf1O54962 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Banf1O54962 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC22.41■■□□□ 1.18
Banf1O54962 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC22.41■■□□□ 1.18
Banf1O54962 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Banf1O54962 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Banf1O54962 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC22.41■■□□□ 1.18
Banf1O54962 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Banf1O54962 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC22.41■■□□□ 1.18
Banf1O54962 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Banf1O54962 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Banf1O54962 Gm12818-201ENSMUST00000117562 1349 ntBASIC22.4■■□□□ 1.18
Banf1O54962 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC22.4■■□□□ 1.18
Banf1O54962 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Banf1O54962 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
Banf1O54962 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC22.39■■□□□ 1.17
Banf1O54962 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Banf1O54962 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Banf1O54962 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC22.39■■□□□ 1.17
Banf1O54962 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
Banf1O54962 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Banf1O54962 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC22.38■■□□□ 1.17
Banf1O54962 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Banf1O54962 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Banf1O54962 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Banf1O54962 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Banf1O54962 AC153911.1-201ENSMUST00000220378 758 ntBASIC22.37■■□□□ 1.17
Banf1O54962 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Banf1O54962 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Banf1O54962 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC22.36■■□□□ 1.17
Banf1O54962 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC22.36■■□□□ 1.17
Banf1O54962 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Banf1O54962 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC22.36■■□□□ 1.17
Banf1O54962 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Banf1O54962 Gm7432-201ENSMUST00000210343 879 ntBASIC22.36■■□□□ 1.17
Banf1O54962 AC154454.1-201ENSMUST00000225253 216 ntBASIC22.36■■□□□ 1.17
Banf1O54962 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC22.36■■□□□ 1.17
Banf1O54962 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Banf1O54962 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Banf1O54962 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Banf1O54962 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Banf1O54962 Gm6277-202ENSMUST00000224036 2779 ntBASIC22.35■■□□□ 1.17
Banf1O54962 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC22.35■■□□□ 1.17
Banf1O54962 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC22.35■■□□□ 1.17
Banf1O54962 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Banf1O54962 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC22.35■■□□□ 1.17
Banf1O54962 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Banf1O54962 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Banf1O54962 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC22.34■■□□□ 1.17
Banf1O54962 Terc-201ENSMUST00000082862 423 ntBASIC22.34■■□□□ 1.17
Banf1O54962 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Banf1O54962 Gm28731-201ENSMUST00000185564 1569 ntBASIC22.33■■□□□ 1.17
Retrieved 100 of 76,532 protein–RNA pairs in 13.8 ms