Protein–RNA interactions for Protein: E0CXC2

Gm28043, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28043E0CXC2 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC21.98■■□□□ 1.11
Gm28043E0CXC2 Gm6277-202ENSMUST00000224036 2779 ntBASIC21.98■■□□□ 1.11
Gm28043E0CXC2 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Gm28043E0CXC2 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Gm28043E0CXC2 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
Gm28043E0CXC2 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Gm28043E0CXC2 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Gm28043E0CXC2 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.11
Gm28043E0CXC2 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC21.95■■□□□ 1.1
Gm28043E0CXC2 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
Gm28043E0CXC2 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC21.95■■□□□ 1.1
Gm28043E0CXC2 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Gm28043E0CXC2 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
Gm28043E0CXC2 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC21.95■■□□□ 1.1
Gm28043E0CXC2 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.1
Gm28043E0CXC2 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Gm28043E0CXC2 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Gm28043E0CXC2 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC21.94■■□□□ 1.1
Gm28043E0CXC2 AC154454.1-201ENSMUST00000225253 216 ntBASIC21.94■■□□□ 1.1
Gm28043E0CXC2 AC167019.3-201ENSMUST00000228225 1266 ntBASIC21.94■■□□□ 1.1
Gm28043E0CXC2 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
Gm28043E0CXC2 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Gm28043E0CXC2 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Gm28043E0CXC2 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Gm28043E0CXC2 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Gm28043E0CXC2 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Gm28043E0CXC2 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Gm28043E0CXC2 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Gm28043E0CXC2 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Gm28043E0CXC2 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Gm28043E0CXC2 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Gm28043E0CXC2 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
Gm28043E0CXC2 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Gm28043E0CXC2 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
Gm28043E0CXC2 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
Gm28043E0CXC2 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Gm28043E0CXC2 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Gm28043E0CXC2 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Gm28043E0CXC2 Mir3960-201ENSMUST00000198213 73 ntBASIC21.91■■□□□ 1.1
Gm28043E0CXC2 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Gm28043E0CXC2 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
Gm28043E0CXC2 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Gm28043E0CXC2 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Gm28043E0CXC2 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Gm28043E0CXC2 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Gm28043E0CXC2 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Gm28043E0CXC2 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Gm28043E0CXC2 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Gm28043E0CXC2 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Gm28043E0CXC2 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.1
Gm28043E0CXC2 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC21.89■■□□□ 1.1
Gm28043E0CXC2 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC21.89■■□□□ 1.09
Gm28043E0CXC2 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Gm28043E0CXC2 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC21.89■■□□□ 1.09
Gm28043E0CXC2 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Gm28043E0CXC2 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Gm28043E0CXC2 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Gm28043E0CXC2 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Gm28043E0CXC2 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC21.88■■□□□ 1.09
Gm28043E0CXC2 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC21.88■■□□□ 1.09
Gm28043E0CXC2 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC21.88■■□□□ 1.09
Gm28043E0CXC2 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Gm28043E0CXC2 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
Gm28043E0CXC2 Gm9812-201ENSMUST00000061934 968 ntBASIC21.87■■□□□ 1.09
Gm28043E0CXC2 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Gm28043E0CXC2 Gm12818-201ENSMUST00000117562 1349 ntBASIC21.86■■□□□ 1.09
Gm28043E0CXC2 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Gm28043E0CXC2 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Gm28043E0CXC2 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Gm28043E0CXC2 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
Gm28043E0CXC2 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC21.85■■□□□ 1.09
Gm28043E0CXC2 Gm45364-201ENSMUST00000210883 159 ntBASIC21.85■■□□□ 1.09
Gm28043E0CXC2 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Gm28043E0CXC2 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
Gm28043E0CXC2 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Gm28043E0CXC2 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Gm28043E0CXC2 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
Gm28043E0CXC2 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Gm28043E0CXC2 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Gm28043E0CXC2 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Gm28043E0CXC2 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Gm28043E0CXC2 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
Gm28043E0CXC2 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Gm28043E0CXC2 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC21.83■■□□□ 1.09
Gm28043E0CXC2 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Gm28043E0CXC2 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Gm28043E0CXC2 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
Gm28043E0CXC2 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Gm28043E0CXC2 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Gm28043E0CXC2 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Gm28043E0CXC2 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
Gm28043E0CXC2 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
Gm28043E0CXC2 AC122317.2-201ENSMUST00000218708 1248 ntBASIC21.81■■□□□ 1.08
Gm28043E0CXC2 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
Gm28043E0CXC2 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
Gm28043E0CXC2 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Gm28043E0CXC2 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC21.8■■□□□ 1.08
Gm28043E0CXC2 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Gm28043E0CXC2 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC21.8■■□□□ 1.08
Gm28043E0CXC2 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Retrieved 100 of 76,532 protein–RNA pairs in 17.2 ms