Protein–RNA interactions for Protein: A0A0U1RNF2

Lcmt1, Leucine carboxyl methyltransferase 1, mousemouse

Predictions only

Length 332 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lcmt1A0A0U1RNF2 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Lcmt1A0A0U1RNF2 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Lcmt1A0A0U1RNF2 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Lcmt1A0A0U1RNF2 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC24.5■■□□□ 1.51
Lcmt1A0A0U1RNF2 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
Lcmt1A0A0U1RNF2 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC24.5■■□□□ 1.51
Lcmt1A0A0U1RNF2 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC24.49■■□□□ 1.51
Lcmt1A0A0U1RNF2 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Lcmt1A0A0U1RNF2 Gm9910-201ENSMUST00000195385 1550 ntBASIC24.49■■□□□ 1.51
Lcmt1A0A0U1RNF2 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC24.48■■□□□ 1.51
Lcmt1A0A0U1RNF2 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Lcmt1A0A0U1RNF2 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC24.48■■□□□ 1.51
Lcmt1A0A0U1RNF2 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC24.48■■□□□ 1.51
Lcmt1A0A0U1RNF2 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC24.48■■□□□ 1.51
Lcmt1A0A0U1RNF2 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
Lcmt1A0A0U1RNF2 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Lcmt1A0A0U1RNF2 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC24.47■■□□□ 1.51
Lcmt1A0A0U1RNF2 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC24.47■■□□□ 1.51
Lcmt1A0A0U1RNF2 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
Lcmt1A0A0U1RNF2 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Lcmt1A0A0U1RNF2 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Lcmt1A0A0U1RNF2 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Lcmt1A0A0U1RNF2 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC24.46■■□□□ 1.51
Lcmt1A0A0U1RNF2 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
Lcmt1A0A0U1RNF2 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
Lcmt1A0A0U1RNF2 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
Lcmt1A0A0U1RNF2 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC24.45■■□□□ 1.5
Lcmt1A0A0U1RNF2 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC24.45■■□□□ 1.5
Lcmt1A0A0U1RNF2 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Lcmt1A0A0U1RNF2 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Lcmt1A0A0U1RNF2 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC24.45■■□□□ 1.5
Lcmt1A0A0U1RNF2 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Lcmt1A0A0U1RNF2 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
Lcmt1A0A0U1RNF2 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Lcmt1A0A0U1RNF2 Gm5987-201ENSMUST00000196433 1151 ntBASIC24.44■■□□□ 1.5
Lcmt1A0A0U1RNF2 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC24.44■■□□□ 1.5
Lcmt1A0A0U1RNF2 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Lcmt1A0A0U1RNF2 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Lcmt1A0A0U1RNF2 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC24.43■■□□□ 1.5
Lcmt1A0A0U1RNF2 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC24.43■■□□□ 1.5
Lcmt1A0A0U1RNF2 Gm9806-201ENSMUST00000051080 552 ntBASIC24.43■■□□□ 1.5
Lcmt1A0A0U1RNF2 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC24.43■■□□□ 1.5
Lcmt1A0A0U1RNF2 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC24.43■■□□□ 1.5
Lcmt1A0A0U1RNF2 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Lcmt1A0A0U1RNF2 AC164433.2-201ENSMUST00000226346 1701 ntBASIC24.43■■□□□ 1.5
Lcmt1A0A0U1RNF2 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC24.43■■□□□ 1.5
Lcmt1A0A0U1RNF2 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC24.42■■□□□ 1.5
Lcmt1A0A0U1RNF2 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC24.41■■□□□ 1.5
Lcmt1A0A0U1RNF2 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Lcmt1A0A0U1RNF2 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Lcmt1A0A0U1RNF2 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC24.41■■□□□ 1.5
Lcmt1A0A0U1RNF2 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Lcmt1A0A0U1RNF2 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC24.4■■□□□ 1.5
Lcmt1A0A0U1RNF2 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC24.4■■□□□ 1.5
Lcmt1A0A0U1RNF2 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Lcmt1A0A0U1RNF2 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC24.4■■□□□ 1.5
Lcmt1A0A0U1RNF2 Scarna2-201ENSMUST00000157560 414 ntBASIC24.39■■□□□ 1.49
Lcmt1A0A0U1RNF2 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
Lcmt1A0A0U1RNF2 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC24.38■■□□□ 1.49
Lcmt1A0A0U1RNF2 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC24.38■■□□□ 1.49
Lcmt1A0A0U1RNF2 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Lcmt1A0A0U1RNF2 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC24.37■■□□□ 1.49
Lcmt1A0A0U1RNF2 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Lcmt1A0A0U1RNF2 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
Lcmt1A0A0U1RNF2 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC24.37■■□□□ 1.49
Lcmt1A0A0U1RNF2 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Lcmt1A0A0U1RNF2 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Lcmt1A0A0U1RNF2 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC24.36■■□□□ 1.49
Lcmt1A0A0U1RNF2 Gm11687-201ENSMUST00000118911 886 ntBASIC24.36■■□□□ 1.49
Lcmt1A0A0U1RNF2 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC24.36■■□□□ 1.49
Lcmt1A0A0U1RNF2 Gm7199-201ENSMUST00000118327 1485 ntBASIC24.35■■□□□ 1.49
Lcmt1A0A0U1RNF2 Gm44428-201ENSMUST00000204474 874 ntBASIC24.35■■□□□ 1.49
Lcmt1A0A0U1RNF2 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC24.35■■□□□ 1.49
Lcmt1A0A0U1RNF2 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC24.34■■□□□ 1.49
Lcmt1A0A0U1RNF2 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC24.34■■□□□ 1.49
Lcmt1A0A0U1RNF2 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC24.34■■□□□ 1.49
Lcmt1A0A0U1RNF2 Gm38160-201ENSMUST00000193090 2499 ntBASIC24.34■■□□□ 1.49
Lcmt1A0A0U1RNF2 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Lcmt1A0A0U1RNF2 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Lcmt1A0A0U1RNF2 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC24.33■■□□□ 1.48
Lcmt1A0A0U1RNF2 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
Lcmt1A0A0U1RNF2 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Lcmt1A0A0U1RNF2 Gm16437-201ENSMUST00000025669 507 ntBASIC24.32■■□□□ 1.48
Lcmt1A0A0U1RNF2 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Lcmt1A0A0U1RNF2 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC24.32■■□□□ 1.48
Lcmt1A0A0U1RNF2 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC24.32■■□□□ 1.48
Lcmt1A0A0U1RNF2 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC24.32■■□□□ 1.48
Lcmt1A0A0U1RNF2 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Lcmt1A0A0U1RNF2 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC24.31■■□□□ 1.48
Lcmt1A0A0U1RNF2 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Lcmt1A0A0U1RNF2 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC24.31■■□□□ 1.48
Lcmt1A0A0U1RNF2 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Lcmt1A0A0U1RNF2 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC24.3■■□□□ 1.48
Lcmt1A0A0U1RNF2 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC24.3■■□□□ 1.48
Lcmt1A0A0U1RNF2 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
Lcmt1A0A0U1RNF2 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Lcmt1A0A0U1RNF2 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Lcmt1A0A0U1RNF2 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC24.29■■□□□ 1.48
Lcmt1A0A0U1RNF2 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC24.29■■□□□ 1.48
Lcmt1A0A0U1RNF2 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC24.29■■□□□ 1.48
Retrieved 100 of 76,532 protein–RNA pairs in 14.8 ms