Protein–RNA interactions for Protein: A0A075B656

Trav18, T cell receptor alpha variable 18 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav18A0A075B656 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trav18A0A075B656 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Trav18A0A075B656 Mir3960-201ENSMUST00000198213 73 ntBASIC18.07■□□□□ 0.48
Trav18A0A075B656 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trav18A0A075B656 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trav18A0A075B656 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC18.07■□□□□ 0.48
Trav18A0A075B656 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Trav18A0A075B656 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trav18A0A075B656 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Trav18A0A075B656 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC18.06■□□□□ 0.48
Trav18A0A075B656 AC122317.2-201ENSMUST00000218708 1248 ntBASIC18.06■□□□□ 0.48
Trav18A0A075B656 Gm9812-201ENSMUST00000061934 968 ntBASIC18.06■□□□□ 0.48
Trav18A0A075B656 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Trav18A0A075B656 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Trav18A0A075B656 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trav18A0A075B656 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trav18A0A075B656 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trav18A0A075B656 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Trav18A0A075B656 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Trav18A0A075B656 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Trav18A0A075B656 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Trav18A0A075B656 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trav18A0A075B656 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Trav18A0A075B656 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC18.05■□□□□ 0.48
Trav18A0A075B656 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Trav18A0A075B656 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Trav18A0A075B656 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trav18A0A075B656 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC18.04■□□□□ 0.48
Trav18A0A075B656 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC18.04■□□□□ 0.48
Trav18A0A075B656 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
Trav18A0A075B656 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Trav18A0A075B656 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trav18A0A075B656 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trav18A0A075B656 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trav18A0A075B656 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Trav18A0A075B656 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trav18A0A075B656 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trav18A0A075B656 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Trav18A0A075B656 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Trav18A0A075B656 Gm7432-201ENSMUST00000210343 879 ntBASIC18.03■□□□□ 0.48
Trav18A0A075B656 Gm45364-201ENSMUST00000210883 159 ntBASIC18.03■□□□□ 0.48
Trav18A0A075B656 AC153911.1-201ENSMUST00000220378 758 ntBASIC18.03■□□□□ 0.48
Trav18A0A075B656 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC18.03■□□□□ 0.48
Trav18A0A075B656 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trav18A0A075B656 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Trav18A0A075B656 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trav18A0A075B656 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC18.02■□□□□ 0.48
Trav18A0A075B656 AC154454.1-201ENSMUST00000225253 216 ntBASIC18.02■□□□□ 0.48
Trav18A0A075B656 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trav18A0A075B656 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC18.02■□□□□ 0.47
Trav18A0A075B656 Gm12818-201ENSMUST00000117562 1349 ntBASIC18.01■□□□□ 0.47
Trav18A0A075B656 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Trav18A0A075B656 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trav18A0A075B656 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC18.01■□□□□ 0.47
Trav18A0A075B656 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trav18A0A075B656 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC18■□□□□ 0.47
Trav18A0A075B656 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Trav18A0A075B656 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trav18A0A075B656 Gm11599-201ENSMUST00000118720 878 ntBASIC18■□□□□ 0.47
Trav18A0A075B656 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trav18A0A075B656 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trav18A0A075B656 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trav18A0A075B656 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC17.99■□□□□ 0.47
Trav18A0A075B656 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Trav18A0A075B656 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trav18A0A075B656 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Trav18A0A075B656 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC17.99■□□□□ 0.47
Trav18A0A075B656 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC17.99■□□□□ 0.47
Trav18A0A075B656 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Trav18A0A075B656 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trav18A0A075B656 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trav18A0A075B656 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trav18A0A075B656 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trav18A0A075B656 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trav18A0A075B656 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trav18A0A075B656 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trav18A0A075B656 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Trav18A0A075B656 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trav18A0A075B656 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Trav18A0A075B656 Terc-201ENSMUST00000082862 423 ntBASIC17.97■□□□□ 0.47
Trav18A0A075B656 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trav18A0A075B656 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trav18A0A075B656 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trav18A0A075B656 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC17.96■□□□□ 0.47
Trav18A0A075B656 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Trav18A0A075B656 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trav18A0A075B656 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trav18A0A075B656 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trav18A0A075B656 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trav18A0A075B656 Gm28731-201ENSMUST00000185564 1569 ntBASIC17.96■□□□□ 0.46
Trav18A0A075B656 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC17.95■□□□□ 0.46
Trav18A0A075B656 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trav18A0A075B656 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trav18A0A075B656 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Trav18A0A075B656 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Trav18A0A075B656 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trav18A0A075B656 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trav18A0A075B656 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trav18A0A075B656 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trav18A0A075B656 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC17.94■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms