Protein–RNA interactions for Protein: A0A075B651

Trav4-4-dv10, T cell receptor alpha variable 4-4-DV10 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-4-dv10A0A075B651 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Trav4-4-dv10A0A075B651 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Trav4-4-dv10A0A075B651 Dmtn-209ENSMUST00000228295 2572 ntBASIC17.23■□□□□ 0.35
Trav4-4-dv10A0A075B651 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trav4-4-dv10A0A075B651 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trav4-4-dv10A0A075B651 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC17.22■□□□□ 0.35
Trav4-4-dv10A0A075B651 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Trav4-4-dv10A0A075B651 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trav4-4-dv10A0A075B651 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trav4-4-dv10A0A075B651 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Trav4-4-dv10A0A075B651 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trav4-4-dv10A0A075B651 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trav4-4-dv10A0A075B651 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trav4-4-dv10A0A075B651 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC17.21■□□□□ 0.35
Trav4-4-dv10A0A075B651 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trav4-4-dv10A0A075B651 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trav4-4-dv10A0A075B651 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Trav4-4-dv10A0A075B651 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.34
Trav4-4-dv10A0A075B651 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Trav4-4-dv10A0A075B651 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
Trav4-4-dv10A0A075B651 AC164433.2-201ENSMUST00000226346 1701 ntBASIC17.2■□□□□ 0.34
Trav4-4-dv10A0A075B651 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Trav4-4-dv10A0A075B651 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC17.2■□□□□ 0.34
Trav4-4-dv10A0A075B651 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trav4-4-dv10A0A075B651 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trav4-4-dv10A0A075B651 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trav4-4-dv10A0A075B651 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trav4-4-dv10A0A075B651 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC17.19■□□□□ 0.34
Trav4-4-dv10A0A075B651 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC17.19■□□□□ 0.34
Trav4-4-dv10A0A075B651 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC17.18■□□□□ 0.34
Trav4-4-dv10A0A075B651 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC17.18■□□□□ 0.34
Trav4-4-dv10A0A075B651 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Trav4-4-dv10A0A075B651 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trav4-4-dv10A0A075B651 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trav4-4-dv10A0A075B651 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trav4-4-dv10A0A075B651 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trav4-4-dv10A0A075B651 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trav4-4-dv10A0A075B651 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trav4-4-dv10A0A075B651 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Trav4-4-dv10A0A075B651 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Trav4-4-dv10A0A075B651 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC17.17■□□□□ 0.34
Trav4-4-dv10A0A075B651 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trav4-4-dv10A0A075B651 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trav4-4-dv10A0A075B651 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trav4-4-dv10A0A075B651 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trav4-4-dv10A0A075B651 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trav4-4-dv10A0A075B651 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Trav4-4-dv10A0A075B651 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trav4-4-dv10A0A075B651 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trav4-4-dv10A0A075B651 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC17.16■□□□□ 0.34
Trav4-4-dv10A0A075B651 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trav4-4-dv10A0A075B651 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trav4-4-dv10A0A075B651 Gm22567-201ENSMUST00000175542 342 ntBASIC17.16■□□□□ 0.34
Trav4-4-dv10A0A075B651 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trav4-4-dv10A0A075B651 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trav4-4-dv10A0A075B651 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trav4-4-dv10A0A075B651 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
Trav4-4-dv10A0A075B651 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC17.15■□□□□ 0.34
Trav4-4-dv10A0A075B651 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trav4-4-dv10A0A075B651 Gm9910-201ENSMUST00000195385 1550 ntBASIC17.15■□□□□ 0.34
Trav4-4-dv10A0A075B651 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trav4-4-dv10A0A075B651 Gm13889-201ENSMUST00000099689 1386 ntBASIC17.15■□□□□ 0.34
Trav4-4-dv10A0A075B651 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Trav4-4-dv10A0A075B651 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Trav4-4-dv10A0A075B651 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Trav4-4-dv10A0A075B651 AC131739.1-201ENSMUST00000221692 1245 ntBASIC17.14■□□□□ 0.33
Trav4-4-dv10A0A075B651 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trav4-4-dv10A0A075B651 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trav4-4-dv10A0A075B651 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trav4-4-dv10A0A075B651 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Trav4-4-dv10A0A075B651 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Trav4-4-dv10A0A075B651 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trav4-4-dv10A0A075B651 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trav4-4-dv10A0A075B651 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trav4-4-dv10A0A075B651 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trav4-4-dv10A0A075B651 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trav4-4-dv10A0A075B651 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trav4-4-dv10A0A075B651 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trav4-4-dv10A0A075B651 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Trav4-4-dv10A0A075B651 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
Trav4-4-dv10A0A075B651 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Trav4-4-dv10A0A075B651 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trav4-4-dv10A0A075B651 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Trav4-4-dv10A0A075B651 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Trav4-4-dv10A0A075B651 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trav4-4-dv10A0A075B651 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC17.11■□□□□ 0.33
Trav4-4-dv10A0A075B651 AC153911.1-201ENSMUST00000220378 758 ntBASIC17.11■□□□□ 0.33
Trav4-4-dv10A0A075B651 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Trav4-4-dv10A0A075B651 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trav4-4-dv10A0A075B651 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trav4-4-dv10A0A075B651 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trav4-4-dv10A0A075B651 AC124392.1-201ENSMUST00000225172 5324 ntBASIC17.11■□□□□ 0.33
Trav4-4-dv10A0A075B651 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Trav4-4-dv10A0A075B651 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trav4-4-dv10A0A075B651 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC17.1■□□□□ 0.33
Trav4-4-dv10A0A075B651 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC17.1■□□□□ 0.33
Trav4-4-dv10A0A075B651 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Trav4-4-dv10A0A075B651 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trav4-4-dv10A0A075B651 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Trav4-4-dv10A0A075B651 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC17.1■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 98.5 ms