Protein–RNA interactions for Protein: A0A075B649

Trav13-2, T cell receptor alpha variable 13-2 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-2A0A075B649 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav13-2A0A075B649 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav13-2A0A075B649 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav13-2A0A075B649 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav13-2A0A075B649 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav13-2A0A075B649 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav13-2A0A075B649 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav13-2A0A075B649 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trav13-2A0A075B649 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav13-2A0A075B649 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trav13-2A0A075B649 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
Trav13-2A0A075B649 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC14.8□□□□□ -0.04
Trav13-2A0A075B649 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav13-2A0A075B649 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trav13-2A0A075B649 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav13-2A0A075B649 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav13-2A0A075B649 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav13-2A0A075B649 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Trav13-2A0A075B649 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
Trav13-2A0A075B649 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC14.79□□□□□ -0.04
Trav13-2A0A075B649 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav13-2A0A075B649 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav13-2A0A075B649 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav13-2A0A075B649 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Trav13-2A0A075B649 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav13-2A0A075B649 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav13-2A0A075B649 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Trav13-2A0A075B649 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav13-2A0A075B649 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC14.78□□□□□ -0.04
Trav13-2A0A075B649 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav13-2A0A075B649 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav13-2A0A075B649 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav13-2A0A075B649 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Trav13-2A0A075B649 Gm4419-202ENSMUST00000226239 1431 ntBASIC14.77□□□□□ -0.04
Trav13-2A0A075B649 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
Trav13-2A0A075B649 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav13-2A0A075B649 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav13-2A0A075B649 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav13-2A0A075B649 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav13-2A0A075B649 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav13-2A0A075B649 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav13-2A0A075B649 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC14.76□□□□□ -0.05
Trav13-2A0A075B649 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Trav13-2A0A075B649 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Trav13-2A0A075B649 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav13-2A0A075B649 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav13-2A0A075B649 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav13-2A0A075B649 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav13-2A0A075B649 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC14.75□□□□□ -0.05
Trav13-2A0A075B649 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav13-2A0A075B649 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC14.75□□□□□ -0.05
Trav13-2A0A075B649 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Trav13-2A0A075B649 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav13-2A0A075B649 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav13-2A0A075B649 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav13-2A0A075B649 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav13-2A0A075B649 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Trav13-2A0A075B649 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC14.73□□□□□ -0.05
Trav13-2A0A075B649 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
Trav13-2A0A075B649 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC14.72□□□□□ -0.05
Trav13-2A0A075B649 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Trav13-2A0A075B649 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Trav13-2A0A075B649 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav13-2A0A075B649 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav13-2A0A075B649 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav13-2A0A075B649 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav13-2A0A075B649 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Trav13-2A0A075B649 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Trav13-2A0A075B649 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.06
Trav13-2A0A075B649 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav13-2A0A075B649 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Trav13-2A0A075B649 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav13-2A0A075B649 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC14.7□□□□□ -0.06
Trav13-2A0A075B649 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav13-2A0A075B649 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav13-2A0A075B649 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
Trav13-2A0A075B649 Nkain2-201ENSMUST00000092602 558 ntBASIC14.69□□□□□ -0.06
Trav13-2A0A075B649 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav13-2A0A075B649 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Trav13-2A0A075B649 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav13-2A0A075B649 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav13-2A0A075B649 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav13-2A0A075B649 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Trav13-2A0A075B649 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Trav13-2A0A075B649 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav13-2A0A075B649 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav13-2A0A075B649 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC14.68□□□□□ -0.06
Trav13-2A0A075B649 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav13-2A0A075B649 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC14.67□□□□□ -0.06
Trav13-2A0A075B649 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC14.67□□□□□ -0.06
Trav13-2A0A075B649 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC14.67□□□□□ -0.06
Trav13-2A0A075B649 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC14.67□□□□□ -0.06
Trav13-2A0A075B649 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav13-2A0A075B649 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav13-2A0A075B649 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Trav13-2A0A075B649 Gm6277-202ENSMUST00000224036 2779 ntBASIC14.66□□□□□ -0.06
Trav13-2A0A075B649 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav13-2A0A075B649 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Trav13-2A0A075B649 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav13-2A0A075B649 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 15.4 ms