Protein–RNA interactions for Protein: A0A075B5Z7

Trav5-1, T cell receptor alpha variable 5-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-1A0A075B5Z7 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
Trav5-1A0A075B5Z7 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Trav5-1A0A075B5Z7 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Trav5-1A0A075B5Z7 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
Trav5-1A0A075B5Z7 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trav5-1A0A075B5Z7 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
Trav5-1A0A075B5Z7 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trav5-1A0A075B5Z7 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Trav5-1A0A075B5Z7 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC19.06■□□□□ 0.64
Trav5-1A0A075B5Z7 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trav5-1A0A075B5Z7 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trav5-1A0A075B5Z7 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trav5-1A0A075B5Z7 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Trav5-1A0A075B5Z7 Gm5921-201ENSMUST00000075898 882 ntBASIC19.05■□□□□ 0.64
Trav5-1A0A075B5Z7 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trav5-1A0A075B5Z7 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trav5-1A0A075B5Z7 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trav5-1A0A075B5Z7 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trav5-1A0A075B5Z7 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trav5-1A0A075B5Z7 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC19.04■□□□□ 0.64
Trav5-1A0A075B5Z7 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trav5-1A0A075B5Z7 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC19.04■□□□□ 0.64
Trav5-1A0A075B5Z7 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trav5-1A0A075B5Z7 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trav5-1A0A075B5Z7 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trav5-1A0A075B5Z7 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trav5-1A0A075B5Z7 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trav5-1A0A075B5Z7 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Trav5-1A0A075B5Z7 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trav5-1A0A075B5Z7 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Trav5-1A0A075B5Z7 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trav5-1A0A075B5Z7 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Trav5-1A0A075B5Z7 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trav5-1A0A075B5Z7 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Trav5-1A0A075B5Z7 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Trav5-1A0A075B5Z7 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trav5-1A0A075B5Z7 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trav5-1A0A075B5Z7 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trav5-1A0A075B5Z7 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Trav5-1A0A075B5Z7 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC19.02■□□□□ 0.63
Trav5-1A0A075B5Z7 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trav5-1A0A075B5Z7 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC19.01■□□□□ 0.63
Trav5-1A0A075B5Z7 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trav5-1A0A075B5Z7 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC19■□□□□ 0.63
Trav5-1A0A075B5Z7 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trav5-1A0A075B5Z7 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC19■□□□□ 0.63
Trav5-1A0A075B5Z7 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC19■□□□□ 0.63
Trav5-1A0A075B5Z7 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC19■□□□□ 0.63
Trav5-1A0A075B5Z7 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC19■□□□□ 0.63
Trav5-1A0A075B5Z7 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trav5-1A0A075B5Z7 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trav5-1A0A075B5Z7 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trav5-1A0A075B5Z7 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Trav5-1A0A075B5Z7 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trav5-1A0A075B5Z7 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trav5-1A0A075B5Z7 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trav5-1A0A075B5Z7 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trav5-1A0A075B5Z7 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Trav5-1A0A075B5Z7 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trav5-1A0A075B5Z7 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trav5-1A0A075B5Z7 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC18.98■□□□□ 0.63
Trav5-1A0A075B5Z7 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC18.98■□□□□ 0.63
Trav5-1A0A075B5Z7 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trav5-1A0A075B5Z7 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Trav5-1A0A075B5Z7 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trav5-1A0A075B5Z7 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trav5-1A0A075B5Z7 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Trav5-1A0A075B5Z7 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
Trav5-1A0A075B5Z7 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trav5-1A0A075B5Z7 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trav5-1A0A075B5Z7 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trav5-1A0A075B5Z7 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trav5-1A0A075B5Z7 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trav5-1A0A075B5Z7 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trav5-1A0A075B5Z7 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Trav5-1A0A075B5Z7 AC153524.1-201ENSMUST00000220436 1935 ntBASIC18.95■□□□□ 0.62
Trav5-1A0A075B5Z7 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trav5-1A0A075B5Z7 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Trav5-1A0A075B5Z7 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trav5-1A0A075B5Z7 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC18.94■□□□□ 0.62
Trav5-1A0A075B5Z7 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC18.94■□□□□ 0.62
Trav5-1A0A075B5Z7 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trav5-1A0A075B5Z7 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trav5-1A0A075B5Z7 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trav5-1A0A075B5Z7 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trav5-1A0A075B5Z7 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trav5-1A0A075B5Z7 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Trav5-1A0A075B5Z7 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC18.92■□□□□ 0.62
Trav5-1A0A075B5Z7 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC18.92■□□□□ 0.62
Trav5-1A0A075B5Z7 Gm28731-201ENSMUST00000185564 1569 ntBASIC18.92■□□□□ 0.62
Trav5-1A0A075B5Z7 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trav5-1A0A075B5Z7 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trav5-1A0A075B5Z7 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC18.91■□□□□ 0.62
Trav5-1A0A075B5Z7 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trav5-1A0A075B5Z7 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Trav5-1A0A075B5Z7 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trav5-1A0A075B5Z7 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trav5-1A0A075B5Z7 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trav5-1A0A075B5Z7 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Trav5-1A0A075B5Z7 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms