Protein–RNA interactions for Protein: S4R2K0

Pdf, Peptide deformylase, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdfS4R2K0 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
PdfS4R2K0 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
PdfS4R2K0 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC11.2□□□□□ -0.62
PdfS4R2K0 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
PdfS4R2K0 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
PdfS4R2K0 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
PdfS4R2K0 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
PdfS4R2K0 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC11.2□□□□□ -0.62
PdfS4R2K0 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
PdfS4R2K0 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC11.2□□□□□ -0.62
PdfS4R2K0 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
PdfS4R2K0 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
PdfS4R2K0 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
PdfS4R2K0 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
PdfS4R2K0 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
PdfS4R2K0 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
PdfS4R2K0 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
PdfS4R2K0 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
PdfS4R2K0 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
PdfS4R2K0 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
PdfS4R2K0 Gm43509-201ENSMUST00000196551 2594 ntBASIC11.2□□□□□ -0.62
PdfS4R2K0 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC11.2□□□□□ -0.62
PdfS4R2K0 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
PdfS4R2K0 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
PdfS4R2K0 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
PdfS4R2K0 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC11.2□□□□□ -0.62
PdfS4R2K0 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
PdfS4R2K0 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
PdfS4R2K0 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC11.2□□□□□ -0.62
PdfS4R2K0 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
PdfS4R2K0 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
PdfS4R2K0 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
PdfS4R2K0 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
PdfS4R2K0 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
PdfS4R2K0 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
PdfS4R2K0 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
PdfS4R2K0 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
PdfS4R2K0 AC155298.2-201ENSMUST00000225485 6226 ntBASIC11.2□□□□□ -0.62
PdfS4R2K0 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
PdfS4R2K0 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
PdfS4R2K0 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
PdfS4R2K0 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
PdfS4R2K0 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
PdfS4R2K0 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
PdfS4R2K0 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
PdfS4R2K0 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
PdfS4R2K0 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
PdfS4R2K0 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
PdfS4R2K0 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
PdfS4R2K0 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
PdfS4R2K0 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC11.19□□□□□ -0.62
PdfS4R2K0 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC11.19□□□□□ -0.62
PdfS4R2K0 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
PdfS4R2K0 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
PdfS4R2K0 Gm28659-201ENSMUST00000188013 759 ntBASIC11.19□□□□□ -0.62
PdfS4R2K0 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC11.19□□□□□ -0.62
PdfS4R2K0 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC11.19□□□□□ -0.62
PdfS4R2K0 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
PdfS4R2K0 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
PdfS4R2K0 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
PdfS4R2K0 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC11.19□□□□□ -0.62
PdfS4R2K0 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC11.19□□□□□ -0.62
PdfS4R2K0 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
PdfS4R2K0 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC11.19□□□□□ -0.62
PdfS4R2K0 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
PdfS4R2K0 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
PdfS4R2K0 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC11.19□□□□□ -0.62
PdfS4R2K0 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
PdfS4R2K0 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
PdfS4R2K0 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
PdfS4R2K0 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
PdfS4R2K0 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
PdfS4R2K0 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC11.18□□□□□ -0.62
PdfS4R2K0 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
PdfS4R2K0 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
PdfS4R2K0 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
PdfS4R2K0 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
PdfS4R2K0 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
PdfS4R2K0 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC11.18□□□□□ -0.62
PdfS4R2K0 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
PdfS4R2K0 Gm24589-201ENSMUST00000116692 94 ntBASIC11.18□□□□□ -0.62
PdfS4R2K0 Gm15165-201ENSMUST00000118140 502 ntBASIC11.18□□□□□ -0.62
PdfS4R2K0 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC11.18□□□□□ -0.62
PdfS4R2K0 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC11.18□□□□□ -0.62
PdfS4R2K0 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC11.18□□□□□ -0.62
PdfS4R2K0 Gm43347-201ENSMUST00000200226 580 ntBASIC11.18□□□□□ -0.62
PdfS4R2K0 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
PdfS4R2K0 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
PdfS4R2K0 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
PdfS4R2K0 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
PdfS4R2K0 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
PdfS4R2K0 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
PdfS4R2K0 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
PdfS4R2K0 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
PdfS4R2K0 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
PdfS4R2K0 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC11.18□□□□□ -0.62
PdfS4R2K0 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC11.18□□□□□ -0.62
PdfS4R2K0 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
PdfS4R2K0 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
PdfS4R2K0 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 75.4 ms