Protein–RNA interactions for Protein: Q9Z2V5

Hdac6, Histone deacetylase 6, mousemouse

Predictions only

Length 1,149 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac6Q9Z2V5 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Hdac6Q9Z2V5 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Hdac6Q9Z2V5 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Hdac6Q9Z2V5 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Hdac6Q9Z2V5 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Hdac6Q9Z2V5 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Hdac6Q9Z2V5 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Hdac6Q9Z2V5 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Hdac6Q9Z2V5 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Hdac6Q9Z2V5 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC18.12■□□□□ 0.49
Hdac6Q9Z2V5 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC18.12■□□□□ 0.49
Hdac6Q9Z2V5 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC18.12■□□□□ 0.49
Hdac6Q9Z2V5 Mir1894-201ENSMUST00000122802 81 ntBASIC18.12■□□□□ 0.49
Hdac6Q9Z2V5 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC18.12■□□□□ 0.49
Hdac6Q9Z2V5 Gm5425-201ENSMUST00000214125 459 ntBASIC18.12■□□□□ 0.49
Hdac6Q9Z2V5 AC155258.1-201ENSMUST00000219303 253 ntBASIC18.12■□□□□ 0.49
Hdac6Q9Z2V5 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC18.12■□□□□ 0.49
Hdac6Q9Z2V5 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Hdac6Q9Z2V5 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Hdac6Q9Z2V5 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Hdac6Q9Z2V5 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Hdac6Q9Z2V5 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Hdac6Q9Z2V5 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Hdac6Q9Z2V5 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Hdac6Q9Z2V5 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Hdac6Q9Z2V5 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Hdac6Q9Z2V5 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Hdac6Q9Z2V5 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Hdac6Q9Z2V5 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Hdac6Q9Z2V5 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Hdac6Q9Z2V5 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Hdac6Q9Z2V5 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Hdac6Q9Z2V5 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Hdac6Q9Z2V5 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Hdac6Q9Z2V5 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Hdac6Q9Z2V5 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Hdac6Q9Z2V5 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC18.11■□□□□ 0.49
Hdac6Q9Z2V5 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Hdac6Q9Z2V5 Gm27839-201ENSMUST00000184242 106 ntBASIC18.11■□□□□ 0.49
Hdac6Q9Z2V5 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Hdac6Q9Z2V5 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC18.11■□□□□ 0.49
Hdac6Q9Z2V5 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Hdac6Q9Z2V5 Gm17794-201ENSMUST00000220252 955 ntBASIC18.11■□□□□ 0.49
Hdac6Q9Z2V5 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC18.11■□□□□ 0.49
Hdac6Q9Z2V5 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Hdac6Q9Z2V5 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC18.11■□□□□ 0.49
Hdac6Q9Z2V5 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Hdac6Q9Z2V5 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Hdac6Q9Z2V5 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Hdac6Q9Z2V5 BC037039-201ENSMUST00000192003 2205 ntBASIC18.11■□□□□ 0.49
Hdac6Q9Z2V5 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Hdac6Q9Z2V5 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Hdac6Q9Z2V5 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Hdac6Q9Z2V5 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Hdac6Q9Z2V5 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Hdac6Q9Z2V5 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC18.11■□□□□ 0.49
Hdac6Q9Z2V5 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Hdac6Q9Z2V5 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Hdac6Q9Z2V5 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Hdac6Q9Z2V5 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Hdac6Q9Z2V5 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Hdac6Q9Z2V5 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Hdac6Q9Z2V5 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC18.1■□□□□ 0.49
Hdac6Q9Z2V5 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Hdac6Q9Z2V5 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Hdac6Q9Z2V5 Gm12742-201ENSMUST00000117326 410 ntBASIC18.1■□□□□ 0.49
Hdac6Q9Z2V5 Gm15240-201ENSMUST00000118156 720 ntBASIC18.1■□□□□ 0.49
Hdac6Q9Z2V5 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Hdac6Q9Z2V5 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Hdac6Q9Z2V5 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Hdac6Q9Z2V5 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Hdac6Q9Z2V5 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Hdac6Q9Z2V5 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Hdac6Q9Z2V5 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Hdac6Q9Z2V5 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Hdac6Q9Z2V5 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Hdac6Q9Z2V5 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Hdac6Q9Z2V5 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Hdac6Q9Z2V5 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Hdac6Q9Z2V5 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC18.09■□□□□ 0.49
Hdac6Q9Z2V5 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Hdac6Q9Z2V5 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC18.09■□□□□ 0.49
Hdac6Q9Z2V5 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC18.09■□□□□ 0.49
Hdac6Q9Z2V5 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Hdac6Q9Z2V5 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Hdac6Q9Z2V5 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Hdac6Q9Z2V5 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Hdac6Q9Z2V5 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Hdac6Q9Z2V5 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Hdac6Q9Z2V5 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Hdac6Q9Z2V5 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Hdac6Q9Z2V5 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC18.09■□□□□ 0.49
Hdac6Q9Z2V5 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC18.09■□□□□ 0.49
Hdac6Q9Z2V5 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC18.09■□□□□ 0.49
Hdac6Q9Z2V5 Gm8835-201ENSMUST00000173096 1169 ntBASIC18.09■□□□□ 0.49
Hdac6Q9Z2V5 Gm2495-201ENSMUST00000191160 466 ntBASIC18.09■□□□□ 0.49
Hdac6Q9Z2V5 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Hdac6Q9Z2V5 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC18.09■□□□□ 0.49
Hdac6Q9Z2V5 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC18.09■□□□□ 0.49
Hdac6Q9Z2V5 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 52.4 ms