Protein–RNA interactions for Protein: Q9Z104

Hmg20b, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, mousemouse

Predictions only

Length 317 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmg20bQ9Z104 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Hmg20bQ9Z104 Gm42934-201ENSMUST00000196920 1345 ntBASIC17.18■□□□□ 0.34
Hmg20bQ9Z104 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Hmg20bQ9Z104 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Hmg20bQ9Z104 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Hmg20bQ9Z104 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC17.18■□□□□ 0.34
Hmg20bQ9Z104 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Hmg20bQ9Z104 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Hmg20bQ9Z104 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Hmg20bQ9Z104 Gm10676-201ENSMUST00000098778 3221 ntBASIC17.17■□□□□ 0.34
Hmg20bQ9Z104 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC17.17■□□□□ 0.34
Hmg20bQ9Z104 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Hmg20bQ9Z104 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Hmg20bQ9Z104 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Hmg20bQ9Z104 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Hmg20bQ9Z104 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Hmg20bQ9Z104 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC17.17■□□□□ 0.34
Hmg20bQ9Z104 Gm2810-201ENSMUST00000118681 990 ntBASIC17.17■□□□□ 0.34
Hmg20bQ9Z104 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC17.17■□□□□ 0.34
Hmg20bQ9Z104 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Hmg20bQ9Z104 Ndufaf2-202ENSMUST00000223734 556 ntBASIC17.17■□□□□ 0.34
Hmg20bQ9Z104 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Hmg20bQ9Z104 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Hmg20bQ9Z104 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Hmg20bQ9Z104 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Hmg20bQ9Z104 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Hmg20bQ9Z104 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Hmg20bQ9Z104 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Hmg20bQ9Z104 AC167013.2-201ENSMUST00000228520 2684 ntBASIC17.17■□□□□ 0.34
Hmg20bQ9Z104 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC17.17■□□□□ 0.34
Hmg20bQ9Z104 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Hmg20bQ9Z104 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Hmg20bQ9Z104 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC17.17■□□□□ 0.34
Hmg20bQ9Z104 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Hmg20bQ9Z104 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Hmg20bQ9Z104 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC17.16■□□□□ 0.34
Hmg20bQ9Z104 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Hmg20bQ9Z104 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Hmg20bQ9Z104 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Hmg20bQ9Z104 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
Hmg20bQ9Z104 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Hmg20bQ9Z104 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Hmg20bQ9Z104 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Hmg20bQ9Z104 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Hmg20bQ9Z104 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Hmg20bQ9Z104 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC17.16■□□□□ 0.34
Hmg20bQ9Z104 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Hmg20bQ9Z104 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Hmg20bQ9Z104 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC17.16■□□□□ 0.34
Hmg20bQ9Z104 Gm10275-202ENSMUST00000168697 495 ntBASIC17.16■□□□□ 0.34
Hmg20bQ9Z104 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC17.16■□□□□ 0.34
Hmg20bQ9Z104 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC17.16■□□□□ 0.34
Hmg20bQ9Z104 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Hmg20bQ9Z104 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Hmg20bQ9Z104 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Hmg20bQ9Z104 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Hmg20bQ9Z104 Gm10275-201ENSMUST00000092620 635 ntBASIC17.16■□□□□ 0.34
Hmg20bQ9Z104 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Hmg20bQ9Z104 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Hmg20bQ9Z104 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Hmg20bQ9Z104 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Hmg20bQ9Z104 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Hmg20bQ9Z104 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Hmg20bQ9Z104 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Hmg20bQ9Z104 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Hmg20bQ9Z104 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC17.16■□□□□ 0.34
Hmg20bQ9Z104 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Hmg20bQ9Z104 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Hmg20bQ9Z104 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Hmg20bQ9Z104 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC17.15■□□□□ 0.34
Hmg20bQ9Z104 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Hmg20bQ9Z104 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Hmg20bQ9Z104 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC17.15■□□□□ 0.34
Hmg20bQ9Z104 Gm4995-201ENSMUST00000117247 432 ntBASIC17.15■□□□□ 0.34
Hmg20bQ9Z104 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC17.15■□□□□ 0.34
Hmg20bQ9Z104 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC17.15■□□□□ 0.34
Hmg20bQ9Z104 Rprl2-201ENSMUST00000157150 290 ntBASIC17.15■□□□□ 0.34
Hmg20bQ9Z104 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC17.15■□□□□ 0.34
Hmg20bQ9Z104 Gm27494-201ENSMUST00000184735 189 ntBASIC17.15■□□□□ 0.34
Hmg20bQ9Z104 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC17.15■□□□□ 0.34
Hmg20bQ9Z104 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC17.15■□□□□ 0.34
Hmg20bQ9Z104 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Hmg20bQ9Z104 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Hmg20bQ9Z104 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Hmg20bQ9Z104 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Hmg20bQ9Z104 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Hmg20bQ9Z104 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC17.15■□□□□ 0.34
Hmg20bQ9Z104 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Hmg20bQ9Z104 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
Hmg20bQ9Z104 Ap5m1-205ENSMUST00000227431 3757 ntBASIC17.14■□□□□ 0.34
Hmg20bQ9Z104 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Hmg20bQ9Z104 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Hmg20bQ9Z104 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Hmg20bQ9Z104 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Hmg20bQ9Z104 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Hmg20bQ9Z104 Gm45630-201ENSMUST00000210243 1911 ntBASIC17.14■□□□□ 0.33
Hmg20bQ9Z104 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Hmg20bQ9Z104 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Hmg20bQ9Z104 Gm11745-201ENSMUST00000121669 448 ntBASIC17.14■□□□□ 0.33
Hmg20bQ9Z104 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC17.14■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms