Protein–RNA interactions for Protein: Q9JIL2

Ccl28, C-C motif chemokine 28, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl28Q9JIL2 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC11.79□□□□□ -0.52
Ccl28Q9JIL2 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ccl28Q9JIL2 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ccl28Q9JIL2 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ccl28Q9JIL2 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ccl28Q9JIL2 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC11.79□□□□□ -0.52
Ccl28Q9JIL2 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC11.79□□□□□ -0.52
Ccl28Q9JIL2 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Ccl28Q9JIL2 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ccl28Q9JIL2 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ccl28Q9JIL2 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ccl28Q9JIL2 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ccl28Q9JIL2 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ccl28Q9JIL2 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ccl28Q9JIL2 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ccl28Q9JIL2 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC11.78□□□□□ -0.52
Ccl28Q9JIL2 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ccl28Q9JIL2 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ccl28Q9JIL2 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Ccl28Q9JIL2 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ccl28Q9JIL2 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ccl28Q9JIL2 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ccl28Q9JIL2 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ccl28Q9JIL2 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
Ccl28Q9JIL2 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Ccl28Q9JIL2 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Ccl28Q9JIL2 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ccl28Q9JIL2 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ccl28Q9JIL2 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ccl28Q9JIL2 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC11.78□□□□□ -0.52
Ccl28Q9JIL2 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Ccl28Q9JIL2 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC11.78□□□□□ -0.52
Ccl28Q9JIL2 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Ccl28Q9JIL2 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Ccl28Q9JIL2 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC11.78□□□□□ -0.52
Ccl28Q9JIL2 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Ccl28Q9JIL2 AV026068-213ENSMUST00000223675 1171 ntBASIC11.78□□□□□ -0.52
Ccl28Q9JIL2 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ccl28Q9JIL2 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ccl28Q9JIL2 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC11.78□□□□□ -0.52
Ccl28Q9JIL2 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Ccl28Q9JIL2 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ccl28Q9JIL2 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ccl28Q9JIL2 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ccl28Q9JIL2 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ccl28Q9JIL2 AC119177.1-201ENSMUST00000227647 1332 ntBASIC11.78□□□□□ -0.52
Ccl28Q9JIL2 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC11.78□□□□□ -0.52
Ccl28Q9JIL2 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Ccl28Q9JIL2 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ccl28Q9JIL2 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ccl28Q9JIL2 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ccl28Q9JIL2 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ccl28Q9JIL2 Gm38391-201ENSMUST00000191720 4069 ntBASIC11.78□□□□□ -0.52
Ccl28Q9JIL2 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Ccl28Q9JIL2 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ccl28Q9JIL2 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ccl28Q9JIL2 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ccl28Q9JIL2 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Ccl28Q9JIL2 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ccl28Q9JIL2 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ccl28Q9JIL2 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.52
Ccl28Q9JIL2 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC11.77□□□□□ -0.52
Ccl28Q9JIL2 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC11.77□□□□□ -0.52
Ccl28Q9JIL2 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC11.77□□□□□ -0.52
Ccl28Q9JIL2 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Ccl28Q9JIL2 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Ccl28Q9JIL2 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Ccl28Q9JIL2 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC11.77□□□□□ -0.52
Ccl28Q9JIL2 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Ccl28Q9JIL2 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.52
Ccl28Q9JIL2 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Ccl28Q9JIL2 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC11.77□□□□□ -0.52
Ccl28Q9JIL2 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Ccl28Q9JIL2 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC11.77□□□□□ -0.52
Ccl28Q9JIL2 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC11.77□□□□□ -0.53
Ccl28Q9JIL2 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ccl28Q9JIL2 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ccl28Q9JIL2 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ccl28Q9JIL2 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC11.77□□□□□ -0.53
Ccl28Q9JIL2 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ccl28Q9JIL2 Trav13-3-201ENSMUST00000117226 336 ntBASIC11.77□□□□□ -0.53
Ccl28Q9JIL2 Gm15593-201ENSMUST00000122085 1008 ntBASIC11.77□□□□□ -0.53
Ccl28Q9JIL2 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ccl28Q9JIL2 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Ccl28Q9JIL2 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Ccl28Q9JIL2 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC11.77□□□□□ -0.53
Ccl28Q9JIL2 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC11.77□□□□□ -0.53
Ccl28Q9JIL2 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC11.77□□□□□ -0.53
Ccl28Q9JIL2 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ccl28Q9JIL2 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ccl28Q9JIL2 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ccl28Q9JIL2 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Ccl28Q9JIL2 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC11.77□□□□□ -0.53
Ccl28Q9JIL2 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ccl28Q9JIL2 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ccl28Q9JIL2 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ccl28Q9JIL2 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Ccl28Q9JIL2 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ccl28Q9JIL2 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC11.77□□□□□ -0.53
Ccl28Q9JIL2 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms