Protein–RNA interactions for Protein: Q9ES00

Ube4b, Ubiquitin conjugation factor E4 B, mousemouse

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4bQ9ES00 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ube4bQ9ES00 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ube4bQ9ES00 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ube4bQ9ES00 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ube4bQ9ES00 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ube4bQ9ES00 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Ube4bQ9ES00 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ube4bQ9ES00 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ube4bQ9ES00 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ube4bQ9ES00 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ube4bQ9ES00 Gm6728-201ENSMUST00000178117 1065 ntBASIC14.03□□□□□ -0.16
Ube4bQ9ES00 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC14.03□□□□□ -0.16
Ube4bQ9ES00 Gm29518-201ENSMUST00000190858 372 ntBASIC14.03□□□□□ -0.16
Ube4bQ9ES00 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ube4bQ9ES00 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Ube4bQ9ES00 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Ube4bQ9ES00 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ube4bQ9ES00 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ube4bQ9ES00 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ube4bQ9ES00 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Ube4bQ9ES00 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Ube4bQ9ES00 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ube4bQ9ES00 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ube4bQ9ES00 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Ube4bQ9ES00 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ube4bQ9ES00 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ube4bQ9ES00 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ube4bQ9ES00 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC14.03□□□□□ -0.16
Ube4bQ9ES00 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ube4bQ9ES00 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ube4bQ9ES00 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ube4bQ9ES00 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Ube4bQ9ES00 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ube4bQ9ES00 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ube4bQ9ES00 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Ube4bQ9ES00 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC14.02□□□□□ -0.16
Ube4bQ9ES00 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Ube4bQ9ES00 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Ube4bQ9ES00 Gm12626-201ENSMUST00000117339 1983 ntBASIC14.02□□□□□ -0.16
Ube4bQ9ES00 Gm12623-201ENSMUST00000119849 1983 ntBASIC14.02□□□□□ -0.16
Ube4bQ9ES00 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ube4bQ9ES00 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Ube4bQ9ES00 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ube4bQ9ES00 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Ube4bQ9ES00 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ube4bQ9ES00 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Ube4bQ9ES00 Mir6404-201ENSMUST00000183699 94 ntBASIC14.02□□□□□ -0.17
Ube4bQ9ES00 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ube4bQ9ES00 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Ube4bQ9ES00 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ube4bQ9ES00 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.17
Ube4bQ9ES00 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ube4bQ9ES00 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Ube4bQ9ES00 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
Ube4bQ9ES00 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC14.02□□□□□ -0.17
Ube4bQ9ES00 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Ube4bQ9ES00 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Ube4bQ9ES00 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ube4bQ9ES00 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ube4bQ9ES00 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Ube4bQ9ES00 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Ube4bQ9ES00 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ube4bQ9ES00 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Ube4bQ9ES00 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ube4bQ9ES00 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC14.01□□□□□ -0.17
Ube4bQ9ES00 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ube4bQ9ES00 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ube4bQ9ES00 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ube4bQ9ES00 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ube4bQ9ES00 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ube4bQ9ES00 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ube4bQ9ES00 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ube4bQ9ES00 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ube4bQ9ES00 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ube4bQ9ES00 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ube4bQ9ES00 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Ube4bQ9ES00 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ube4bQ9ES00 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
Ube4bQ9ES00 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ube4bQ9ES00 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC14.01□□□□□ -0.17
Ube4bQ9ES00 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC14.01□□□□□ -0.17
Ube4bQ9ES00 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC14.01□□□□□ -0.17
Ube4bQ9ES00 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ube4bQ9ES00 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Ube4bQ9ES00 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ube4bQ9ES00 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ube4bQ9ES00 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ube4bQ9ES00 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ube4bQ9ES00 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ube4bQ9ES00 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ube4bQ9ES00 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ube4bQ9ES00 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ube4bQ9ES00 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ube4bQ9ES00 Gm11405-201ENSMUST00000118689 1556 ntBASIC14□□□□□ -0.17
Ube4bQ9ES00 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ube4bQ9ES00 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Ube4bQ9ES00 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Ube4bQ9ES00 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ube4bQ9ES00 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ube4bQ9ES00 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms