Protein–RNA interactions for Protein: Q9D3E6

Stag1, Cohesin subunit SA-1, mousemouse

Predictions only

Length 1,258 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stag1Q9D3E6 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Stag1Q9D3E6 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Stag1Q9D3E6 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Stag1Q9D3E6 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Stag1Q9D3E6 Gm5357-201ENSMUST00000212720 1924 ntBASIC17.33■□□□□ 0.36
Stag1Q9D3E6 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Stag1Q9D3E6 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Stag1Q9D3E6 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Stag1Q9D3E6 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Stag1Q9D3E6 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC17.33■□□□□ 0.36
Stag1Q9D3E6 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC17.32■□□□□ 0.36
Stag1Q9D3E6 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Stag1Q9D3E6 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Stag1Q9D3E6 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Stag1Q9D3E6 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Stag1Q9D3E6 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Stag1Q9D3E6 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Stag1Q9D3E6 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Stag1Q9D3E6 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Stag1Q9D3E6 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Stag1Q9D3E6 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Stag1Q9D3E6 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC17.32■□□□□ 0.36
Stag1Q9D3E6 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
Stag1Q9D3E6 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Stag1Q9D3E6 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Stag1Q9D3E6 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Stag1Q9D3E6 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Stag1Q9D3E6 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Stag1Q9D3E6 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Stag1Q9D3E6 AC154412.1-201ENSMUST00000226540 2786 ntBASIC17.32■□□□□ 0.36
Stag1Q9D3E6 AC174678.1-201ENSMUST00000228007 2749 ntBASIC17.32■□□□□ 0.36
Stag1Q9D3E6 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Stag1Q9D3E6 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Stag1Q9D3E6 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Stag1Q9D3E6 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Stag1Q9D3E6 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Stag1Q9D3E6 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Stag1Q9D3E6 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC17.31■□□□□ 0.36
Stag1Q9D3E6 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Stag1Q9D3E6 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Stag1Q9D3E6 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Stag1Q9D3E6 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Stag1Q9D3E6 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Stag1Q9D3E6 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Stag1Q9D3E6 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Stag1Q9D3E6 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC17.31■□□□□ 0.36
Stag1Q9D3E6 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC17.31■□□□□ 0.36
Stag1Q9D3E6 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Stag1Q9D3E6 Gm6218-201ENSMUST00000219812 628 ntBASIC17.31■□□□□ 0.36
Stag1Q9D3E6 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Stag1Q9D3E6 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Stag1Q9D3E6 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Stag1Q9D3E6 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC17.31■□□□□ 0.36
Stag1Q9D3E6 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Stag1Q9D3E6 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC17.31■□□□□ 0.36
Stag1Q9D3E6 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Stag1Q9D3E6 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Stag1Q9D3E6 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Stag1Q9D3E6 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Stag1Q9D3E6 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Stag1Q9D3E6 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Stag1Q9D3E6 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Stag1Q9D3E6 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Stag1Q9D3E6 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Stag1Q9D3E6 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Stag1Q9D3E6 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Stag1Q9D3E6 Efs-202ENSMUST00000227037 2540 ntBASIC17.3■□□□□ 0.36
Stag1Q9D3E6 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Stag1Q9D3E6 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Stag1Q9D3E6 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Stag1Q9D3E6 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Stag1Q9D3E6 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Stag1Q9D3E6 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
Stag1Q9D3E6 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Stag1Q9D3E6 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC17.3■□□□□ 0.36
Stag1Q9D3E6 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Stag1Q9D3E6 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Stag1Q9D3E6 Gm6473-201ENSMUST00000188572 1210 ntBASIC17.3■□□□□ 0.36
Stag1Q9D3E6 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC17.3■□□□□ 0.36
Stag1Q9D3E6 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Stag1Q9D3E6 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Stag1Q9D3E6 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Stag1Q9D3E6 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Stag1Q9D3E6 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Stag1Q9D3E6 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC17.3■□□□□ 0.36
Stag1Q9D3E6 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Stag1Q9D3E6 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Stag1Q9D3E6 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Stag1Q9D3E6 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Stag1Q9D3E6 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Stag1Q9D3E6 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Stag1Q9D3E6 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Stag1Q9D3E6 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC17.29■□□□□ 0.36
Stag1Q9D3E6 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Stag1Q9D3E6 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC17.29■□□□□ 0.36
Stag1Q9D3E6 Gm9229-201ENSMUST00000222777 126 ntBASIC17.29■□□□□ 0.36
Stag1Q9D3E6 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Stag1Q9D3E6 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC17.29■□□□□ 0.36
Stag1Q9D3E6 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC17.29■□□□□ 0.36
Stag1Q9D3E6 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms