Protein–RNA interactions for Protein: Q9CYI0

Protein Njmu-R1, mousemouse

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q9CYI0 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Q9CYI0 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Q9CYI0 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Q9CYI0 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Q9CYI0 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Q9CYI0 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Q9CYI0 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC16.11■□□□□ 0.17
Q9CYI0 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Q9CYI0 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Q9CYI0 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Q9CYI0 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Q9CYI0 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Q9CYI0 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC16.1■□□□□ 0.17
Q9CYI0 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Q9CYI0 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Q9CYI0 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Q9CYI0 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Q9CYI0 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Q9CYI0 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC16.1■□□□□ 0.17
Q9CYI0 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Q9CYI0 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC16.1■□□□□ 0.17
Q9CYI0 Gm18766-201ENSMUST00000189811 808 ntBASIC16.1■□□□□ 0.17
Q9CYI0 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Q9CYI0 Olfr286-202ENSMUST00000205305 969 ntBASIC16.1■□□□□ 0.17
Q9CYI0 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC16.1■□□□□ 0.17
Q9CYI0 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Q9CYI0 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC16.1■□□□□ 0.17
Q9CYI0 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Q9CYI0 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Q9CYI0 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Q9CYI0 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Q9CYI0 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Q9CYI0 Tcf21-202ENSMUST00000218002 1788 ntBASIC16.1■□□□□ 0.17
Q9CYI0 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Q9CYI0 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Q9CYI0 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Q9CYI0 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Q9CYI0 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Q9CYI0 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC16.09■□□□□ 0.17
Q9CYI0 Sybu-209ENSMUST00000228639 4113 ntBASIC16.09■□□□□ 0.17
Q9CYI0 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Q9CYI0 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Q9CYI0 Gm8410-201ENSMUST00000117225 605 ntBASIC16.09■□□□□ 0.17
Q9CYI0 Gm13453-201ENSMUST00000118708 357 ntBASIC16.09■□□□□ 0.17
Q9CYI0 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Q9CYI0 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC16.09■□□□□ 0.17
Q9CYI0 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Q9CYI0 Gm17837-201ENSMUST00000186435 985 ntBASIC16.09■□□□□ 0.17
Q9CYI0 Gm28630-201ENSMUST00000187806 498 ntBASIC16.09■□□□□ 0.17
Q9CYI0 Gm45098-201ENSMUST00000207179 657 ntBASIC16.09■□□□□ 0.17
Q9CYI0 Gm9182-201ENSMUST00000217829 639 ntBASIC16.09■□□□□ 0.17
Q9CYI0 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Q9CYI0 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Q9CYI0 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Q9CYI0 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Q9CYI0 Gm13127-201ENSMUST00000118978 1389 ntBASIC16.09■□□□□ 0.17
Q9CYI0 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Q9CYI0 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Q9CYI0 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Q9CYI0 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Q9CYI0 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC16.09■□□□□ 0.17
Q9CYI0 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
Q9CYI0 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Q9CYI0 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Q9CYI0 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Q9CYI0 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Q9CYI0 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Q9CYI0 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Q9CYI0 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Q9CYI0 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Q9CYI0 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Q9CYI0 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Q9CYI0 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Q9CYI0 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Q9CYI0 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Q9CYI0 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Q9CYI0 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Q9CYI0 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Q9CYI0 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Q9CYI0 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC16.08■□□□□ 0.16
Q9CYI0 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Q9CYI0 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Q9CYI0 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC16.08■□□□□ 0.16
Q9CYI0 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Q9CYI0 Ighv8-7-201ENSMUST00000194349 297 ntBASIC16.08■□□□□ 0.16
Q9CYI0 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Q9CYI0 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
Q9CYI0 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Q9CYI0 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Q9CYI0 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Q9CYI0 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Q9CYI0 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Q9CYI0 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
Q9CYI0 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Q9CYI0 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Q9CYI0 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Q9CYI0 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Q9CYI0 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Q9CYI0 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Q9CYI0 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms