Protein–RNA interactions for Protein: Q9CWM4

Pfdn1, Prefoldin subunit 1, mousemouse

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn1Q9CWM4 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pfdn1Q9CWM4 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pfdn1Q9CWM4 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Pfdn1Q9CWM4 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pfdn1Q9CWM4 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC12.81□□□□□ -0.36
Pfdn1Q9CWM4 Gm42632-201ENSMUST00000201707 2411 ntBASIC12.81□□□□□ -0.36
Pfdn1Q9CWM4 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Pfdn1Q9CWM4 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pfdn1Q9CWM4 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pfdn1Q9CWM4 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pfdn1Q9CWM4 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pfdn1Q9CWM4 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pfdn1Q9CWM4 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Pfdn1Q9CWM4 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Pfdn1Q9CWM4 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Pfdn1Q9CWM4 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC12.81□□□□□ -0.36
Pfdn1Q9CWM4 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Pfdn1Q9CWM4 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Pfdn1Q9CWM4 Gm44878-201ENSMUST00000205812 1295 ntBASIC12.81□□□□□ -0.36
Pfdn1Q9CWM4 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pfdn1Q9CWM4 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pfdn1Q9CWM4 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC12.81□□□□□ -0.36
Pfdn1Q9CWM4 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC12.81□□□□□ -0.36
Pfdn1Q9CWM4 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pfdn1Q9CWM4 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pfdn1Q9CWM4 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pfdn1Q9CWM4 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pfdn1Q9CWM4 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pfdn1Q9CWM4 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Pfdn1Q9CWM4 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pfdn1Q9CWM4 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC12.81□□□□□ -0.36
Pfdn1Q9CWM4 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pfdn1Q9CWM4 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC12.81□□□□□ -0.36
Pfdn1Q9CWM4 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Pfdn1Q9CWM4 Gm11405-201ENSMUST00000118689 1556 ntBASIC12.81□□□□□ -0.36
Pfdn1Q9CWM4 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pfdn1Q9CWM4 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC12.81□□□□□ -0.36
Pfdn1Q9CWM4 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pfdn1Q9CWM4 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pfdn1Q9CWM4 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Pfdn1Q9CWM4 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pfdn1Q9CWM4 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pfdn1Q9CWM4 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pfdn1Q9CWM4 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Pfdn1Q9CWM4 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pfdn1Q9CWM4 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pfdn1Q9CWM4 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pfdn1Q9CWM4 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Pfdn1Q9CWM4 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Pfdn1Q9CWM4 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pfdn1Q9CWM4 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC12.8□□□□□ -0.36
Pfdn1Q9CWM4 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Pfdn1Q9CWM4 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pfdn1Q9CWM4 Gm45743-201ENSMUST00000212701 2795 ntBASIC12.8□□□□□ -0.36
Pfdn1Q9CWM4 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Pfdn1Q9CWM4 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC12.8□□□□□ -0.36
Pfdn1Q9CWM4 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pfdn1Q9CWM4 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pfdn1Q9CWM4 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Pfdn1Q9CWM4 H2-K2-201ENSMUST00000174250 1049 ntBASIC12.8□□□□□ -0.36
Pfdn1Q9CWM4 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC12.8□□□□□ -0.36
Pfdn1Q9CWM4 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC12.8□□□□□ -0.36
Pfdn1Q9CWM4 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC12.8□□□□□ -0.36
Pfdn1Q9CWM4 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Pfdn1Q9CWM4 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pfdn1Q9CWM4 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Pfdn1Q9CWM4 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pfdn1Q9CWM4 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pfdn1Q9CWM4 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pfdn1Q9CWM4 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pfdn1Q9CWM4 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pfdn1Q9CWM4 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pfdn1Q9CWM4 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pfdn1Q9CWM4 Tmbim1-202ENSMUST00000113796 11011 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pfdn1Q9CWM4 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pfdn1Q9CWM4 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
Pfdn1Q9CWM4 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pfdn1Q9CWM4 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pfdn1Q9CWM4 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pfdn1Q9CWM4 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC12.79□□□□□ -0.36
Pfdn1Q9CWM4 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC12.79□□□□□ -0.36
Pfdn1Q9CWM4 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
Pfdn1Q9CWM4 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC12.79□□□□□ -0.36
Pfdn1Q9CWM4 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Pfdn1Q9CWM4 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pfdn1Q9CWM4 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Pfdn1Q9CWM4 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Pfdn1Q9CWM4 Gm5874-201ENSMUST00000096101 508 ntBASIC12.79□□□□□ -0.36
Pfdn1Q9CWM4 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pfdn1Q9CWM4 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pfdn1Q9CWM4 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Pfdn1Q9CWM4 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC12.79□□□□□ -0.36
Pfdn1Q9CWM4 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pfdn1Q9CWM4 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Pfdn1Q9CWM4 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pfdn1Q9CWM4 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Pfdn1Q9CWM4 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC12.79□□□□□ -0.36
Pfdn1Q9CWM4 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pfdn1Q9CWM4 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC12.79□□□□□ -0.36
Pfdn1Q9CWM4 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms