Protein–RNA interactions for Protein: Q9CQD0

Rpl39l, RIKEN cDNA 4930517K11, mousemouse

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl39lQ9CQD0 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Rpl39lQ9CQD0 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Rpl39lQ9CQD0 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Rpl39lQ9CQD0 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Rpl39lQ9CQD0 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Rpl39lQ9CQD0 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Rpl39lQ9CQD0 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Rpl39lQ9CQD0 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Rpl39lQ9CQD0 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC9.49□□□□□ -0.89
Rpl39lQ9CQD0 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Rpl39lQ9CQD0 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC9.49□□□□□ -0.89
Rpl39lQ9CQD0 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Rpl39lQ9CQD0 Gm6198-201ENSMUST00000191337 2929 ntBASIC9.49□□□□□ -0.89
Rpl39lQ9CQD0 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC9.49□□□□□ -0.89
Rpl39lQ9CQD0 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Rpl39lQ9CQD0 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC9.49□□□□□ -0.89
Rpl39lQ9CQD0 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC9.49□□□□□ -0.89
Rpl39lQ9CQD0 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC9.49□□□□□ -0.89
Rpl39lQ9CQD0 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC9.49□□□□□ -0.89
Rpl39lQ9CQD0 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Rpl39lQ9CQD0 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Rpl39lQ9CQD0 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Rpl39lQ9CQD0 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Rpl39lQ9CQD0 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Rpl39lQ9CQD0 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Rpl39lQ9CQD0 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC9.49□□□□□ -0.89
Rpl39lQ9CQD0 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC9.49□□□□□ -0.89
Rpl39lQ9CQD0 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Rpl39lQ9CQD0 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC9.49□□□□□ -0.89
Rpl39lQ9CQD0 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC9.49□□□□□ -0.89
Rpl39lQ9CQD0 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC9.49□□□□□ -0.89
Rpl39lQ9CQD0 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC9.49□□□□□ -0.89
Rpl39lQ9CQD0 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC9.49□□□□□ -0.89
Rpl39lQ9CQD0 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Rpl39lQ9CQD0 Mxra8os-201ENSMUST00000097740 687 ntBASIC9.49□□□□□ -0.89
Rpl39lQ9CQD0 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Rpl39lQ9CQD0 Zkscan4-202ENSMUST00000225845 1506 ntBASIC9.49□□□□□ -0.89
Rpl39lQ9CQD0 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC9.49□□□□□ -0.89
Rpl39lQ9CQD0 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Rpl39lQ9CQD0 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC9.49□□□□□ -0.89
Rpl39lQ9CQD0 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC9.49□□□□□ -0.89
Rpl39lQ9CQD0 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Rpl39lQ9CQD0 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Rpl39lQ9CQD0 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Rpl39lQ9CQD0 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Rpl39lQ9CQD0 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Rpl39lQ9CQD0 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Rpl39lQ9CQD0 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Rpl39lQ9CQD0 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Rpl39lQ9CQD0 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Rpl39lQ9CQD0 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC9.48□□□□□ -0.89
Rpl39lQ9CQD0 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC9.48□□□□□ -0.89
Rpl39lQ9CQD0 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Rpl39lQ9CQD0 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC9.48□□□□□ -0.89
Rpl39lQ9CQD0 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Rpl39lQ9CQD0 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC9.48□□□□□ -0.89
Rpl39lQ9CQD0 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Rpl39lQ9CQD0 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Rpl39lQ9CQD0 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Rpl39lQ9CQD0 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Rpl39lQ9CQD0 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC9.48□□□□□ -0.89
Rpl39lQ9CQD0 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC9.48□□□□□ -0.89
Rpl39lQ9CQD0 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC9.48□□□□□ -0.89
Rpl39lQ9CQD0 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC9.48□□□□□ -0.89
Rpl39lQ9CQD0 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC9.48□□□□□ -0.89
Rpl39lQ9CQD0 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Rpl39lQ9CQD0 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Rpl39lQ9CQD0 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Rpl39lQ9CQD0 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Rpl39lQ9CQD0 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC9.48□□□□□ -0.89
Rpl39lQ9CQD0 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC9.48□□□□□ -0.89
Rpl39lQ9CQD0 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Rpl39lQ9CQD0 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Rpl39lQ9CQD0 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC9.48□□□□□ -0.89
Rpl39lQ9CQD0 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC9.48□□□□□ -0.89
Rpl39lQ9CQD0 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Rpl39lQ9CQD0 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC9.48□□□□□ -0.89
Rpl39lQ9CQD0 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Rpl39lQ9CQD0 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC9.48□□□□□ -0.89
Rpl39lQ9CQD0 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Rpl39lQ9CQD0 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Rpl39lQ9CQD0 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Rpl39lQ9CQD0 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Rpl39lQ9CQD0 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Rpl39lQ9CQD0 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Rpl39lQ9CQD0 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Rpl39lQ9CQD0 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Rpl39lQ9CQD0 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Rpl39lQ9CQD0 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Rpl39lQ9CQD0 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Rpl39lQ9CQD0 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC9.47□□□□□ -0.89
Rpl39lQ9CQD0 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Rpl39lQ9CQD0 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Rpl39lQ9CQD0 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Rpl39lQ9CQD0 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC9.47□□□□□ -0.89
Rpl39lQ9CQD0 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Rpl39lQ9CQD0 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Rpl39lQ9CQD0 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Rpl39lQ9CQD0 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Rpl39lQ9CQD0 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms