Protein–RNA interactions for Protein: Q9CQC3

Protein C9orf135 homolog, mousemouse

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q9CQC3 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Q9CQC3 Nudt18-203ENSMUST00000228768 1578 ntBASIC15.11■□□□□ 0.01
Q9CQC3 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Q9CQC3 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Q9CQC3 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Q9CQC3 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Q9CQC3 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Q9CQC3 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Q9CQC3 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Q9CQC3 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Q9CQC3 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Q9CQC3 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Q9CQC3 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Q9CQC3 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Q9CQC3 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Q9CQC3 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Q9CQC3 Gm27494-201ENSMUST00000184735 189 ntBASIC15.11■□□□□ 0.01
Q9CQC3 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Q9CQC3 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC15.11■□□□□ 0.01
Q9CQC3 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC15.11■□□□□ 0.01
Q9CQC3 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Q9CQC3 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Q9CQC3 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC15.11■□□□□ 0.01
Q9CQC3 Nupl1-207ENSMUST00000225311 2475 ntBASIC15.11■□□□□ 0.01
Q9CQC3 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Q9CQC3 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Q9CQC3 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Q9CQC3 Gm45630-201ENSMUST00000210243 1911 ntBASIC15.11■□□□□ 0.01
Q9CQC3 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Q9CQC3 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Q9CQC3 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC15.11■□□□□ 0.01
Q9CQC3 Ap5m1-205ENSMUST00000227431 3757 ntBASIC15.11■□□□□ 0.01
Q9CQC3 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC15.11■□□□□ 0.01
Q9CQC3 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Q9CQC3 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Q9CQC3 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Q9CQC3 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Q9CQC3 Gm13332-201ENSMUST00000120451 1398 ntBASIC15.11■□□□□ 0.01
Q9CQC3 Sorbs3-204ENSMUST00000227929 2460 ntBASIC15.1■□□□□ 0.01
Q9CQC3 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Q9CQC3 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
Q9CQC3 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Q9CQC3 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Q9CQC3 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Q9CQC3 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Q9CQC3 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Q9CQC3 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Q9CQC3 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Q9CQC3 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Q9CQC3 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Q9CQC3 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Q9CQC3 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Q9CQC3 Rprl2-201ENSMUST00000157150 290 ntBASIC15.1■□□□□ 0.01
Q9CQC3 AC123645.1-201ENSMUST00000228469 605 ntBASIC15.1■□□□□ 0.01
Q9CQC3 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Q9CQC3 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Q9CQC3 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC15.1■□□□□ 0.01
Q9CQC3 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Q9CQC3 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Q9CQC3 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Q9CQC3 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Q9CQC3 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Q9CQC3 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
Q9CQC3 Gm6756-201ENSMUST00000180647 1620 ntBASIC15.1■□□□□ 0.01
Q9CQC3 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Q9CQC3 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC15.09■□□□□ 0.01
Q9CQC3 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC15.09■□□□□ 0.01
Q9CQC3 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Q9CQC3 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
Q9CQC3 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Q9CQC3 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Q9CQC3 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Q9CQC3 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Q9CQC3 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC15.09■□□□□ 0.01
Q9CQC3 Mir1895-201ENSMUST00000122615 79 ntBASIC15.09■□□□□ 0.01
Q9CQC3 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Q9CQC3 CT943659.1-201ENSMUST00000215459 326 ntBASIC15.09■□□□□ 0.01
Q9CQC3 AC124549.3-201ENSMUST00000225541 367 ntBASIC15.09■□□□□ 0.01
Q9CQC3 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Q9CQC3 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC15.09■□□□□ 0.01
Q9CQC3 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Q9CQC3 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Q9CQC3 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Q9CQC3 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Q9CQC3 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Q9CQC3 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Q9CQC3 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Q9CQC3 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Q9CQC3 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Q9CQC3 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Q9CQC3 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Q9CQC3 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Q9CQC3 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0.01
Q9CQC3 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Q9CQC3 Gm13365-201ENSMUST00000121188 973 ntBASIC15.08■□□□□ 0
Q9CQC3 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Q9CQC3 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC15.08■□□□□ 0
Q9CQC3 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC15.08■□□□□ 0
Q9CQC3 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC15.08■□□□□ 0
Q9CQC3 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC15.08■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms