Protein–RNA interactions for Protein: Q9CPR6

Krt88, Keratin 88, mousemouse

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt88Q9CPR6 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Krt88Q9CPR6 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Krt88Q9CPR6 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Krt88Q9CPR6 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Krt88Q9CPR6 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC13.17□□□□□ -0.3
Krt88Q9CPR6 Gm7284-201ENSMUST00000131667 944 ntBASIC13.17□□□□□ -0.3
Krt88Q9CPR6 Gm37019-201ENSMUST00000192133 2134 ntBASIC13.17□□□□□ -0.3
Krt88Q9CPR6 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
Krt88Q9CPR6 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Krt88Q9CPR6 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Krt88Q9CPR6 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Krt88Q9CPR6 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Krt88Q9CPR6 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Krt88Q9CPR6 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Krt88Q9CPR6 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Krt88Q9CPR6 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Krt88Q9CPR6 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC13.17□□□□□ -0.3
Krt88Q9CPR6 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Krt88Q9CPR6 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Krt88Q9CPR6 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Krt88Q9CPR6 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Krt88Q9CPR6 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Krt88Q9CPR6 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC13.17□□□□□ -0.3
Krt88Q9CPR6 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Krt88Q9CPR6 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
Krt88Q9CPR6 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Krt88Q9CPR6 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Krt88Q9CPR6 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Krt88Q9CPR6 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Krt88Q9CPR6 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Krt88Q9CPR6 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC13.16□□□□□ -0.3
Krt88Q9CPR6 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC13.16□□□□□ -0.3
Krt88Q9CPR6 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Krt88Q9CPR6 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Krt88Q9CPR6 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Krt88Q9CPR6 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC13.16□□□□□ -0.3
Krt88Q9CPR6 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Krt88Q9CPR6 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Krt88Q9CPR6 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Krt88Q9CPR6 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Krt88Q9CPR6 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
Krt88Q9CPR6 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Krt88Q9CPR6 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Krt88Q9CPR6 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Krt88Q9CPR6 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Krt88Q9CPR6 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Krt88Q9CPR6 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC13.16□□□□□ -0.3
Krt88Q9CPR6 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC13.16□□□□□ -0.3
Krt88Q9CPR6 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC13.16□□□□□ -0.3
Krt88Q9CPR6 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Krt88Q9CPR6 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Krt88Q9CPR6 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
Krt88Q9CPR6 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Krt88Q9CPR6 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Krt88Q9CPR6 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Krt88Q9CPR6 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Krt88Q9CPR6 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC13.15□□□□□ -0.3
Krt88Q9CPR6 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Krt88Q9CPR6 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC13.15□□□□□ -0.3
Krt88Q9CPR6 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Krt88Q9CPR6 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Krt88Q9CPR6 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Krt88Q9CPR6 Gm14451-201ENSMUST00000121581 1542 ntBASIC13.15□□□□□ -0.3
Krt88Q9CPR6 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Krt88Q9CPR6 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Krt88Q9CPR6 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC13.15□□□□□ -0.3
Krt88Q9CPR6 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Krt88Q9CPR6 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
Krt88Q9CPR6 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC13.15□□□□□ -0.3
Krt88Q9CPR6 Gm15372-201ENSMUST00000120729 834 ntBASIC13.15□□□□□ -0.3
Krt88Q9CPR6 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC13.15□□□□□ -0.3
Krt88Q9CPR6 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Krt88Q9CPR6 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Krt88Q9CPR6 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Krt88Q9CPR6 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Krt88Q9CPR6 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Krt88Q9CPR6 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Krt88Q9CPR6 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Krt88Q9CPR6 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Krt88Q9CPR6 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Krt88Q9CPR6 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Krt88Q9CPR6 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Krt88Q9CPR6 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Krt88Q9CPR6 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Krt88Q9CPR6 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Krt88Q9CPR6 AC166491.1-201ENSMUST00000227053 2308 ntBASIC13.14□□□□□ -0.31
Krt88Q9CPR6 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC13.14□□□□□ -0.31
Krt88Q9CPR6 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Krt88Q9CPR6 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Krt88Q9CPR6 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Krt88Q9CPR6 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Krt88Q9CPR6 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Krt88Q9CPR6 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Krt88Q9CPR6 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Krt88Q9CPR6 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Krt88Q9CPR6 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Krt88Q9CPR6 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Krt88Q9CPR6 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Krt88Q9CPR6 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC13.14□□□□□ -0.31
Krt88Q9CPR6 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms