Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cdh23Q99PF4 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cdh23Q99PF4 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cdh23Q99PF4 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Cdh23Q99PF4 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC14.58□□□□□ -0.08
Cdh23Q99PF4 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cdh23Q99PF4 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cdh23Q99PF4 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Cdh23Q99PF4 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Cdh23Q99PF4 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC14.58□□□□□ -0.08
Cdh23Q99PF4 Gm17823-201ENSMUST00000217830 1006 ntBASIC14.58□□□□□ -0.08
Cdh23Q99PF4 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cdh23Q99PF4 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Cdh23Q99PF4 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Cdh23Q99PF4 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cdh23Q99PF4 Gm12997-201ENSMUST00000120207 640 ntBASIC14.57□□□□□ -0.08
Cdh23Q99PF4 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cdh23Q99PF4 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Cdh23Q99PF4 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC14.57□□□□□ -0.08
Cdh23Q99PF4 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Cdh23Q99PF4 Nsd1-205ENSMUST00000224693 852 ntBASIC14.57□□□□□ -0.08
Cdh23Q99PF4 Rpl24-201ENSMUST00000023269 677 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cdh23Q99PF4 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Cdh23Q99PF4 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cdh23Q99PF4 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC14.57□□□□□ -0.08
Cdh23Q99PF4 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Cdh23Q99PF4 Carlr-201ENSMUST00000181515 2574 ntBASIC14.57□□□□□ -0.08
Cdh23Q99PF4 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Cdh23Q99PF4 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cdh23Q99PF4 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Cdh23Q99PF4 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Cdh23Q99PF4 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC14.57□□□□□ -0.08
Cdh23Q99PF4 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cdh23Q99PF4 Gm5850-201ENSMUST00000192923 1206 ntBASIC14.57□□□□□ -0.08
Cdh23Q99PF4 AC133598.1-201ENSMUST00000224327 660 ntBASIC14.57□□□□□ -0.08
Cdh23Q99PF4 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cdh23Q99PF4 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Cdh23Q99PF4 Gm14780-201ENSMUST00000118387 2737 ntBASIC14.57□□□□□ -0.08
Cdh23Q99PF4 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cdh23Q99PF4 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cdh23Q99PF4 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cdh23Q99PF4 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cdh23Q99PF4 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cdh23Q99PF4 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Cdh23Q99PF4 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC14.57□□□□□ -0.08
Cdh23Q99PF4 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cdh23Q99PF4 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cdh23Q99PF4 Gm13612-201ENSMUST00000119276 390 ntBASIC14.57□□□□□ -0.08
Cdh23Q99PF4 Proscos-202ENSMUST00000178990 666 ntBASIC14.57□□□□□ -0.08
Cdh23Q99PF4 Gm4804-201ENSMUST00000182234 999 ntBASIC14.57□□□□□ -0.08
Cdh23Q99PF4 Gm17795-201ENSMUST00000214505 757 ntBASIC14.57□□□□□ -0.08
Cdh23Q99PF4 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC14.57□□□□□ -0.08
Cdh23Q99PF4 Cts7-204ENSMUST00000225321 1257 ntBASIC14.57□□□□□ -0.08
Cdh23Q99PF4 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cdh23Q99PF4 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Cdh23Q99PF4 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cdh23Q99PF4 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cdh23Q99PF4 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Cdh23Q99PF4 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cdh23Q99PF4 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC14.56□□□□□ -0.08
Cdh23Q99PF4 Gm29396-201ENSMUST00000185659 716 ntBASIC14.56□□□□□ -0.08
Cdh23Q99PF4 AC123645.1-201ENSMUST00000228469 605 ntBASIC14.56□□□□□ -0.08
Cdh23Q99PF4 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Cdh23Q99PF4 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC14.56□□□□□ -0.08
Cdh23Q99PF4 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cdh23Q99PF4 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC14.56□□□□□ -0.08
Cdh23Q99PF4 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cdh23Q99PF4 Efs-202ENSMUST00000227037 2540 ntBASIC14.56□□□□□ -0.08
Cdh23Q99PF4 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cdh23Q99PF4 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cdh23Q99PF4 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC14.56□□□□□ -0.08
Cdh23Q99PF4 Gm2639-201ENSMUST00000156881 1297 ntBASIC14.56□□□□□ -0.08
Cdh23Q99PF4 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cdh23Q99PF4 Gm24514-201ENSMUST00000174961 285 ntBASIC14.56□□□□□ -0.08
Cdh23Q99PF4 Mir7032-201ENSMUST00000185154 79 ntBASIC14.56□□□□□ -0.08
Cdh23Q99PF4 Gm43133-201ENSMUST00000197472 463 ntBASIC14.56□□□□□ -0.08
Cdh23Q99PF4 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC14.56□□□□□ -0.08
Cdh23Q99PF4 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cdh23Q99PF4 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Cdh23Q99PF4 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cdh23Q99PF4 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cdh23Q99PF4 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC14.56□□□□□ -0.08
Cdh23Q99PF4 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Cdh23Q99PF4 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC14.56□□□□□ -0.08
Cdh23Q99PF4 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC14.56□□□□□ -0.08
Cdh23Q99PF4 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cdh23Q99PF4 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cdh23Q99PF4 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cdh23Q99PF4 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC14.55□□□□□ -0.08
Cdh23Q99PF4 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC14.55□□□□□ -0.08
Cdh23Q99PF4 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cdh23Q99PF4 Trav13-3-201ENSMUST00000117226 336 ntBASIC14.55□□□□□ -0.08
Cdh23Q99PF4 Gm12416-201ENSMUST00000120911 1008 ntBASIC14.55□□□□□ -0.08
Cdh23Q99PF4 B9d1os-201ENSMUST00000137010 674 ntBASIC14.55□□□□□ -0.08
Cdh23Q99PF4 Gm29649-201ENSMUST00000185649 419 ntBASIC14.55□□□□□ -0.08
Cdh23Q99PF4 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cdh23Q99PF4 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC14.55□□□□□ -0.08
Cdh23Q99PF4 BC037039-201ENSMUST00000192003 2205 ntBASIC14.55□□□□□ -0.08
Cdh23Q99PF4 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cdh23Q99PF4 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms