Protein–RNA interactions for Protein: Q99MH6

Nkd1, Protein naked cuticle homolog 1, mousemouse

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkd1Q99MH6 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Nkd1Q99MH6 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Nkd1Q99MH6 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Nkd1Q99MH6 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC13.77□□□□□ -0.21
Nkd1Q99MH6 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Nkd1Q99MH6 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Nkd1Q99MH6 Best4-ps-201ENSMUST00000129783 1380 ntBASIC13.77□□□□□ -0.21
Nkd1Q99MH6 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC13.77□□□□□ -0.21
Nkd1Q99MH6 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC13.77□□□□□ -0.21
Nkd1Q99MH6 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC13.77□□□□□ -0.21
Nkd1Q99MH6 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Nkd1Q99MH6 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC13.77□□□□□ -0.21
Nkd1Q99MH6 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC13.77□□□□□ -0.21
Nkd1Q99MH6 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Nkd1Q99MH6 Gm18246-201ENSMUST00000221023 728 ntBASIC13.77□□□□□ -0.21
Nkd1Q99MH6 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Nkd1Q99MH6 AC147366.1-201ENSMUST00000227671 852 ntBASIC13.77□□□□□ -0.21
Nkd1Q99MH6 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Nkd1Q99MH6 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Nkd1Q99MH6 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC13.77□□□□□ -0.21
Nkd1Q99MH6 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Nkd1Q99MH6 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC13.77□□□□□ -0.21
Nkd1Q99MH6 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Nkd1Q99MH6 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC13.77□□□□□ -0.21
Nkd1Q99MH6 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Nkd1Q99MH6 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Nkd1Q99MH6 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nkd1Q99MH6 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nkd1Q99MH6 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nkd1Q99MH6 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nkd1Q99MH6 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Nkd1Q99MH6 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Nkd1Q99MH6 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Nkd1Q99MH6 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC13.76□□□□□ -0.21
Nkd1Q99MH6 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nkd1Q99MH6 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nkd1Q99MH6 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC13.76□□□□□ -0.21
Nkd1Q99MH6 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nkd1Q99MH6 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nkd1Q99MH6 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Nkd1Q99MH6 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Nkd1Q99MH6 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nkd1Q99MH6 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Nkd1Q99MH6 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC13.76□□□□□ -0.21
Nkd1Q99MH6 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Nkd1Q99MH6 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nkd1Q99MH6 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nkd1Q99MH6 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC13.76□□□□□ -0.21
Nkd1Q99MH6 Nupl1-207ENSMUST00000225311 2475 ntBASIC13.76□□□□□ -0.21
Nkd1Q99MH6 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Nkd1Q99MH6 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC13.76□□□□□ -0.21
Nkd1Q99MH6 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nkd1Q99MH6 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Nkd1Q99MH6 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nkd1Q99MH6 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Nkd1Q99MH6 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nkd1Q99MH6 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nkd1Q99MH6 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
Nkd1Q99MH6 Gm44645-201ENSMUST00000205492 1653 ntBASIC13.75□□□□□ -0.21
Nkd1Q99MH6 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nkd1Q99MH6 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC13.75□□□□□ -0.21
Nkd1Q99MH6 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nkd1Q99MH6 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nkd1Q99MH6 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nkd1Q99MH6 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Nkd1Q99MH6 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nkd1Q99MH6 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Nkd1Q99MH6 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Nkd1Q99MH6 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nkd1Q99MH6 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Nkd1Q99MH6 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Nkd1Q99MH6 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nkd1Q99MH6 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nkd1Q99MH6 Gm11452-201ENSMUST00000122376 690 ntBASIC13.75□□□□□ -0.21
Nkd1Q99MH6 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Nkd1Q99MH6 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Nkd1Q99MH6 Gm29019-202ENSMUST00000188623 564 ntTSL 2 BASIC13.75□□□□□ -0.21
Nkd1Q99MH6 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nkd1Q99MH6 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC13.75□□□□□ -0.21
Nkd1Q99MH6 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC13.75□□□□□ -0.21
Nkd1Q99MH6 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nkd1Q99MH6 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nkd1Q99MH6 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nkd1Q99MH6 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nkd1Q99MH6 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nkd1Q99MH6 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nkd1Q99MH6 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nkd1Q99MH6 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nkd1Q99MH6 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nkd1Q99MH6 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nkd1Q99MH6 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Nkd1Q99MH6 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nkd1Q99MH6 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nkd1Q99MH6 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nkd1Q99MH6 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC13.75□□□□□ -0.21
Nkd1Q99MH6 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Nkd1Q99MH6 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC13.75□□□□□ -0.21
Nkd1Q99MH6 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nkd1Q99MH6 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nkd1Q99MH6 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 9.6 ms