Protein–RNA interactions for Protein: Q99LI7

Cstf3, Cleavage stimulation factor subunit 3, mousemouse

Known RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf3Q99LI7 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Cstf3Q99LI7 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cstf3Q99LI7 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cstf3Q99LI7 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cstf3Q99LI7 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Cstf3Q99LI7 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cstf3Q99LI7 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cstf3Q99LI7 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC14.1□□□□□ -0.15
Cstf3Q99LI7 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cstf3Q99LI7 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cstf3Q99LI7 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cstf3Q99LI7 Gm9726-201ENSMUST00000180321 678 ntBASIC14.1□□□□□ -0.15
Cstf3Q99LI7 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC14.1□□□□□ -0.15
Cstf3Q99LI7 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cstf3Q99LI7 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cstf3Q99LI7 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cstf3Q99LI7 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cstf3Q99LI7 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cstf3Q99LI7 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC14.1□□□□□ -0.15
Cstf3Q99LI7 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Cstf3Q99LI7 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC14.1□□□□□ -0.15
Cstf3Q99LI7 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cstf3Q99LI7 Gm38577-201ENSMUST00000221531 4545 ntBASIC14.1□□□□□ -0.15
Cstf3Q99LI7 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC14.1□□□□□ -0.15
Cstf3Q99LI7 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cstf3Q99LI7 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC14.1□□□□□ -0.15
Cstf3Q99LI7 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cstf3Q99LI7 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cstf3Q99LI7 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cstf3Q99LI7 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cstf3Q99LI7 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Cstf3Q99LI7 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cstf3Q99LI7 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Cstf3Q99LI7 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cstf3Q99LI7 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cstf3Q99LI7 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cstf3Q99LI7 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cstf3Q99LI7 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Cstf3Q99LI7 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
Cstf3Q99LI7 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cstf3Q99LI7 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
Cstf3Q99LI7 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cstf3Q99LI7 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Cstf3Q99LI7 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Cstf3Q99LI7 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC14.09□□□□□ -0.15
Cstf3Q99LI7 Gm8597-201ENSMUST00000191525 1109 ntBASIC14.09□□□□□ -0.15
Cstf3Q99LI7 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Cstf3Q99LI7 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC14.09□□□□□ -0.15
Cstf3Q99LI7 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC14.09□□□□□ -0.15
Cstf3Q99LI7 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cstf3Q99LI7 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC14.09□□□□□ -0.15
Cstf3Q99LI7 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cstf3Q99LI7 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Cstf3Q99LI7 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cstf3Q99LI7 Sorbs3-204ENSMUST00000227929 2460 ntBASIC14.09□□□□□ -0.15
Cstf3Q99LI7 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cstf3Q99LI7 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC14.09□□□□□ -0.15
Cstf3Q99LI7 Gm44981-201ENSMUST00000205549 1943 ntBASIC14.09□□□□□ -0.15
Cstf3Q99LI7 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cstf3Q99LI7 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cstf3Q99LI7 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Cstf3Q99LI7 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC14.09□□□□□ -0.15
Cstf3Q99LI7 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Cstf3Q99LI7 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cstf3Q99LI7 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Cstf3Q99LI7 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cstf3Q99LI7 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC14.09□□□□□ -0.15
Cstf3Q99LI7 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cstf3Q99LI7 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Cstf3Q99LI7 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Cstf3Q99LI7 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.15
Cstf3Q99LI7 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Cstf3Q99LI7 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Cstf3Q99LI7 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Cstf3Q99LI7 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cstf3Q99LI7 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Cstf3Q99LI7 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cstf3Q99LI7 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC14.08□□□□□ -0.16
Cstf3Q99LI7 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Cstf3Q99LI7 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Cstf3Q99LI7 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cstf3Q99LI7 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cstf3Q99LI7 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cstf3Q99LI7 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cstf3Q99LI7 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC14.08□□□□□ -0.16
Cstf3Q99LI7 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Cstf3Q99LI7 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Cstf3Q99LI7 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC14.08□□□□□ -0.16
Cstf3Q99LI7 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC14.08□□□□□ -0.16
Cstf3Q99LI7 Mir7036b-201ENSMUST00000184791 63 ntBASIC14.08□□□□□ -0.16
Cstf3Q99LI7 Gm7461-201ENSMUST00000058918 827 ntBASIC14.08□□□□□ -0.16
Cstf3Q99LI7 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cstf3Q99LI7 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cstf3Q99LI7 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cstf3Q99LI7 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC14.08□□□□□ -0.16
Cstf3Q99LI7 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cstf3Q99LI7 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cstf3Q99LI7 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Cstf3Q99LI7 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cstf3Q99LI7 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms