Protein–RNA interactions for Protein: Q99JR8

Smarcd2, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2, mousemouse

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd2Q99JR8 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Smarcd2Q99JR8 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Smarcd2Q99JR8 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC14.67□□□□□ -0.06
Smarcd2Q99JR8 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Smarcd2Q99JR8 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC14.67□□□□□ -0.06
Smarcd2Q99JR8 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC14.67□□□□□ -0.06
Smarcd2Q99JR8 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Smarcd2Q99JR8 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Smarcd2Q99JR8 Gm25857-201ENSMUST00000082788 129 ntBASIC14.67□□□□□ -0.06
Smarcd2Q99JR8 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Smarcd2Q99JR8 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Smarcd2Q99JR8 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Smarcd2Q99JR8 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Smarcd2Q99JR8 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Smarcd2Q99JR8 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Smarcd2Q99JR8 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Smarcd2Q99JR8 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Smarcd2Q99JR8 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Smarcd2Q99JR8 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Smarcd2Q99JR8 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Smarcd2Q99JR8 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Smarcd2Q99JR8 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Smarcd2Q99JR8 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Smarcd2Q99JR8 Gm45667-201ENSMUST00000210380 1316 ntBASIC14.66□□□□□ -0.06
Smarcd2Q99JR8 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Smarcd2Q99JR8 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Smarcd2Q99JR8 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Smarcd2Q99JR8 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Smarcd2Q99JR8 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Smarcd2Q99JR8 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC14.66□□□□□ -0.06
Smarcd2Q99JR8 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Smarcd2Q99JR8 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Smarcd2Q99JR8 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Smarcd2Q99JR8 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Smarcd2Q99JR8 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Smarcd2Q99JR8 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Smarcd2Q99JR8 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC14.66□□□□□ -0.06
Smarcd2Q99JR8 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Smarcd2Q99JR8 Gm11918-201ENSMUST00000121660 179 ntBASIC14.66□□□□□ -0.06
Smarcd2Q99JR8 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Smarcd2Q99JR8 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC14.66□□□□□ -0.06
Smarcd2Q99JR8 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC14.66□□□□□ -0.06
Smarcd2Q99JR8 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Smarcd2Q99JR8 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC14.66□□□□□ -0.06
Smarcd2Q99JR8 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Smarcd2Q99JR8 AC155286.1-201ENSMUST00000218632 448 ntBASIC14.66□□□□□ -0.06
Smarcd2Q99JR8 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Smarcd2Q99JR8 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Smarcd2Q99JR8 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC14.66□□□□□ -0.06
Smarcd2Q99JR8 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Smarcd2Q99JR8 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
Smarcd2Q99JR8 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Smarcd2Q99JR8 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC14.66□□□□□ -0.06
Smarcd2Q99JR8 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Smarcd2Q99JR8 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Smarcd2Q99JR8 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Smarcd2Q99JR8 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Smarcd2Q99JR8 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC14.66□□□□□ -0.06
Smarcd2Q99JR8 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Smarcd2Q99JR8 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Smarcd2Q99JR8 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Smarcd2Q99JR8 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Smarcd2Q99JR8 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Smarcd2Q99JR8 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC14.65□□□□□ -0.06
Smarcd2Q99JR8 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Smarcd2Q99JR8 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Smarcd2Q99JR8 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Smarcd2Q99JR8 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Smarcd2Q99JR8 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Smarcd2Q99JR8 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Smarcd2Q99JR8 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC14.65□□□□□ -0.06
Smarcd2Q99JR8 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Smarcd2Q99JR8 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Smarcd2Q99JR8 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Smarcd2Q99JR8 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC14.65□□□□□ -0.06
Smarcd2Q99JR8 Ldha-ps-201ENSMUST00000119390 995 ntBASIC14.65□□□□□ -0.06
Smarcd2Q99JR8 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Smarcd2Q99JR8 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Smarcd2Q99JR8 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Smarcd2Q99JR8 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Smarcd2Q99JR8 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Smarcd2Q99JR8 AC149294.4-201ENSMUST00000227870 882 ntBASIC14.65□□□□□ -0.06
Smarcd2Q99JR8 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Smarcd2Q99JR8 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Smarcd2Q99JR8 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC14.65□□□□□ -0.06
Smarcd2Q99JR8 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Smarcd2Q99JR8 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Smarcd2Q99JR8 Gm9252-201ENSMUST00000172364 1602 ntBASIC14.65□□□□□ -0.06
Smarcd2Q99JR8 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Smarcd2Q99JR8 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Smarcd2Q99JR8 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Smarcd2Q99JR8 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Smarcd2Q99JR8 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Smarcd2Q99JR8 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Smarcd2Q99JR8 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Smarcd2Q99JR8 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Smarcd2Q99JR8 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Smarcd2Q99JR8 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Smarcd2Q99JR8 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Smarcd2Q99JR8 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 61.3 ms