Protein–RNA interactions for Protein: Q99J62

Rfc4, Replication factor C subunit 4, mousemouse

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc4Q99J62 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC16.75■□□□□ 0.27
Rfc4Q99J62 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Rfc4Q99J62 Gm21854-201ENSMUST00000179901 471 ntBASIC16.75■□□□□ 0.27
Rfc4Q99J62 Gm8602-201ENSMUST00000184045 607 ntBASIC16.75■□□□□ 0.27
Rfc4Q99J62 Gm10766-202ENSMUST00000194123 606 ntBASIC16.75■□□□□ 0.27
Rfc4Q99J62 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rfc4Q99J62 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Rfc4Q99J62 AC121804.3-201ENSMUST00000223420 295 ntBASIC16.75■□□□□ 0.27
Rfc4Q99J62 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rfc4Q99J62 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Rfc4Q99J62 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC16.75■□□□□ 0.27
Rfc4Q99J62 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rfc4Q99J62 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rfc4Q99J62 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rfc4Q99J62 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC16.75■□□□□ 0.27
Rfc4Q99J62 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rfc4Q99J62 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rfc4Q99J62 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rfc4Q99J62 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rfc4Q99J62 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rfc4Q99J62 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Rfc4Q99J62 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rfc4Q99J62 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rfc4Q99J62 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rfc4Q99J62 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rfc4Q99J62 Gm7820-201ENSMUST00000121012 1052 ntBASIC16.74■□□□□ 0.27
Rfc4Q99J62 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Rfc4Q99J62 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Rfc4Q99J62 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC16.74■□□□□ 0.27
Rfc4Q99J62 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rfc4Q99J62 Gm31326-201ENSMUST00000191856 1048 ntBASIC16.74■□□□□ 0.27
Rfc4Q99J62 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Rfc4Q99J62 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC16.74■□□□□ 0.27
Rfc4Q99J62 AC165157.4-201ENSMUST00000220587 139 ntBASIC16.74■□□□□ 0.27
Rfc4Q99J62 AC154687.2-201ENSMUST00000223853 640 ntBASIC16.74■□□□□ 0.27
Rfc4Q99J62 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rfc4Q99J62 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rfc4Q99J62 Mir125a-201ENSMUST00000083545 68 ntBASIC16.74■□□□□ 0.27
Rfc4Q99J62 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rfc4Q99J62 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rfc4Q99J62 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rfc4Q99J62 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rfc4Q99J62 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rfc4Q99J62 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rfc4Q99J62 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rfc4Q99J62 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC16.74■□□□□ 0.27
Rfc4Q99J62 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rfc4Q99J62 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
Rfc4Q99J62 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC16.73■□□□□ 0.27
Rfc4Q99J62 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Rfc4Q99J62 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Rfc4Q99J62 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
Rfc4Q99J62 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rfc4Q99J62 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Rfc4Q99J62 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
Rfc4Q99J62 Gm11918-201ENSMUST00000121660 179 ntBASIC16.73■□□□□ 0.27
Rfc4Q99J62 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC16.73■□□□□ 0.27
Rfc4Q99J62 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rfc4Q99J62 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC16.73■□□□□ 0.27
Rfc4Q99J62 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC16.73■□□□□ 0.27
Rfc4Q99J62 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC16.73■□□□□ 0.27
Rfc4Q99J62 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Rfc4Q99J62 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rfc4Q99J62 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rfc4Q99J62 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Rfc4Q99J62 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC16.73■□□□□ 0.27
Rfc4Q99J62 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC16.73■□□□□ 0.27
Rfc4Q99J62 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Rfc4Q99J62 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Rfc4Q99J62 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rfc4Q99J62 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Rfc4Q99J62 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Rfc4Q99J62 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rfc4Q99J62 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rfc4Q99J62 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rfc4Q99J62 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rfc4Q99J62 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rfc4Q99J62 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rfc4Q99J62 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rfc4Q99J62 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rfc4Q99J62 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rfc4Q99J62 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rfc4Q99J62 AC154412.1-201ENSMUST00000226540 2786 ntBASIC16.72■□□□□ 0.27
Rfc4Q99J62 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Rfc4Q99J62 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC16.72■□□□□ 0.27
Rfc4Q99J62 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rfc4Q99J62 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rfc4Q99J62 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rfc4Q99J62 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Rfc4Q99J62 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Rfc4Q99J62 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Rfc4Q99J62 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Rfc4Q99J62 Gm18624-201ENSMUST00000220966 658 ntBASIC16.72■□□□□ 0.27
Rfc4Q99J62 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Rfc4Q99J62 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Rfc4Q99J62 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rfc4Q99J62 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rfc4Q99J62 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Rfc4Q99J62 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Rfc4Q99J62 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms