Protein–RNA interactions for Protein: Q920F6

Smc1b, Structural maintenance of chromosomes protein 1B, mousemouse

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1bQ920F6 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC16.84■□□□□ 0.29
Smc1bQ920F6 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Smc1bQ920F6 Gm25144-201ENSMUST00000179561 110 ntBASIC16.84■□□□□ 0.29
Smc1bQ920F6 Gm25352-201ENSMUST00000179815 110 ntBASIC16.84■□□□□ 0.29
Smc1bQ920F6 Gm38225-201ENSMUST00000194001 393 ntBASIC16.84■□□□□ 0.29
Smc1bQ920F6 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Smc1bQ920F6 Gm9794-201ENSMUST00000202370 423 ntBASIC16.84■□□□□ 0.29
Smc1bQ920F6 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Smc1bQ920F6 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Smc1bQ920F6 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Smc1bQ920F6 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Smc1bQ920F6 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Smc1bQ920F6 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC16.84■□□□□ 0.29
Smc1bQ920F6 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Smc1bQ920F6 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC16.84■□□□□ 0.29
Smc1bQ920F6 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.29
Smc1bQ920F6 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Smc1bQ920F6 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
Smc1bQ920F6 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
Smc1bQ920F6 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Smc1bQ920F6 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
Smc1bQ920F6 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Smc1bQ920F6 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Smc1bQ920F6 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Smc1bQ920F6 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC16.83■□□□□ 0.28
Smc1bQ920F6 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC16.83■□□□□ 0.28
Smc1bQ920F6 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
Smc1bQ920F6 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Smc1bQ920F6 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
Smc1bQ920F6 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC16.83■□□□□ 0.28
Smc1bQ920F6 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Smc1bQ920F6 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Smc1bQ920F6 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Smc1bQ920F6 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC16.83■□□□□ 0.28
Smc1bQ920F6 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC16.83■□□□□ 0.28
Smc1bQ920F6 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Smc1bQ920F6 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Smc1bQ920F6 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Smc1bQ920F6 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Smc1bQ920F6 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC16.83■□□□□ 0.28
Smc1bQ920F6 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Smc1bQ920F6 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Smc1bQ920F6 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Smc1bQ920F6 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Smc1bQ920F6 Gm10710-201ENSMUST00000047876 3971 ntBASIC16.82■□□□□ 0.28
Smc1bQ920F6 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Smc1bQ920F6 Syt7-205ENSMUST00000224135 1557 ntBASIC16.82■□□□□ 0.28
Smc1bQ920F6 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Smc1bQ920F6 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC16.82■□□□□ 0.28
Smc1bQ920F6 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Smc1bQ920F6 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Smc1bQ920F6 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Smc1bQ920F6 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Smc1bQ920F6 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Smc1bQ920F6 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Smc1bQ920F6 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Smc1bQ920F6 Gm43433-201ENSMUST00000196573 481 ntBASIC16.82■□□□□ 0.28
Smc1bQ920F6 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Smc1bQ920F6 AC132467.2-202ENSMUST00000227726 559 ntBASIC16.82■□□□□ 0.28
Smc1bQ920F6 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Smc1bQ920F6 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Smc1bQ920F6 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Smc1bQ920F6 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Smc1bQ920F6 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Smc1bQ920F6 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Smc1bQ920F6 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Smc1bQ920F6 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Smc1bQ920F6 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Smc1bQ920F6 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC16.82■□□□□ 0.28
Smc1bQ920F6 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Smc1bQ920F6 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
Smc1bQ920F6 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
Smc1bQ920F6 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Smc1bQ920F6 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Smc1bQ920F6 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
Smc1bQ920F6 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC16.81■□□□□ 0.28
Smc1bQ920F6 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC16.81■□□□□ 0.28
Smc1bQ920F6 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Smc1bQ920F6 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Smc1bQ920F6 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Smc1bQ920F6 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Smc1bQ920F6 Gm16215-201ENSMUST00000161990 637 ntBASIC16.81■□□□□ 0.28
Smc1bQ920F6 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC16.81■□□□□ 0.28
Smc1bQ920F6 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Smc1bQ920F6 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Smc1bQ920F6 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Smc1bQ920F6 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC16.81■□□□□ 0.28
Smc1bQ920F6 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC16.81■□□□□ 0.28
Smc1bQ920F6 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Smc1bQ920F6 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Smc1bQ920F6 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Smc1bQ920F6 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Smc1bQ920F6 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Smc1bQ920F6 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Smc1bQ920F6 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Smc1bQ920F6 AC130669.1-201ENSMUST00000228537 1672 ntBASIC16.81■□□□□ 0.28
Smc1bQ920F6 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Smc1bQ920F6 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Smc1bQ920F6 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Smc1bQ920F6 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 51.2 ms