Protein–RNA interactions for Protein: Q91Y11

Pcdha9, Protocadherin alpha-9, mousemouse

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9Q91Y11 Gm44981-201ENSMUST00000205549 1943 ntBASIC15.49■□□□□ 0.07
Pcdha9Q91Y11 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdha9Q91Y11 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
Pcdha9Q91Y11 Gm10605-202ENSMUST00000183019 3198 ntBASIC15.48■□□□□ 0.07
Pcdha9Q91Y11 AC148324.1-201ENSMUST00000219034 4240 ntBASIC15.48■□□□□ 0.07
Pcdha9Q91Y11 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdha9Q91Y11 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdha9Q91Y11 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC15.48■□□□□ 0.07
Pcdha9Q91Y11 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdha9Q91Y11 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdha9Q91Y11 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdha9Q91Y11 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdha9Q91Y11 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdha9Q91Y11 Gm4081-201ENSMUST00000195287 1838 ntBASIC15.48■□□□□ 0.07
Pcdha9Q91Y11 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdha9Q91Y11 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdha9Q91Y11 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdha9Q91Y11 Gm37736-201ENSMUST00000193564 2802 ntBASIC15.48■□□□□ 0.07
Pcdha9Q91Y11 Gm22065-201ENSMUST00000103753 110 ntBASIC15.48■□□□□ 0.07
Pcdha9Q91Y11 Gm22066-201ENSMUST00000103761 110 ntBASIC15.48■□□□□ 0.07
Pcdha9Q91Y11 Gm24932-201ENSMUST00000103763 110 ntBASIC15.48■□□□□ 0.07
Pcdha9Q91Y11 Gm24115-201ENSMUST00000103799 110 ntBASIC15.48■□□□□ 0.07
Pcdha9Q91Y11 Gm22190-201ENSMUST00000103827 110 ntBASIC15.48■□□□□ 0.07
Pcdha9Q91Y11 Gm22191-201ENSMUST00000103831 110 ntBASIC15.48■□□□□ 0.07
Pcdha9Q91Y11 Gm24721-201ENSMUST00000103849 110 ntBASIC15.48■□□□□ 0.07
Pcdha9Q91Y11 Gm28018-201ENSMUST00000103869 110 ntBASIC15.48■□□□□ 0.07
Pcdha9Q91Y11 Gm26399-201ENSMUST00000103937 110 ntBASIC15.48■□□□□ 0.07
Pcdha9Q91Y11 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdha9Q91Y11 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdha9Q91Y11 Gm10275-202ENSMUST00000168697 495 ntBASIC15.48■□□□□ 0.07
Pcdha9Q91Y11 Gm25349-201ENSMUST00000177728 110 ntBASIC15.48■□□□□ 0.07
Pcdha9Q91Y11 Gm23616-201ENSMUST00000177797 110 ntBASIC15.48■□□□□ 0.07
Pcdha9Q91Y11 Gm25871-201ENSMUST00000177816 110 ntBASIC15.48■□□□□ 0.07
Pcdha9Q91Y11 Gm24752-201ENSMUST00000178240 110 ntBASIC15.48■□□□□ 0.07
Pcdha9Q91Y11 Gm24496-201ENSMUST00000178287 110 ntBASIC15.48■□□□□ 0.07
Pcdha9Q91Y11 Gm25649-201ENSMUST00000178476 110 ntBASIC15.48■□□□□ 0.07
Pcdha9Q91Y11 Gm25548-201ENSMUST00000178681 110 ntBASIC15.48■□□□□ 0.07
Pcdha9Q91Y11 Gm23147-201ENSMUST00000178841 110 ntBASIC15.48■□□□□ 0.07
Pcdha9Q91Y11 Gm26095-201ENSMUST00000179270 110 ntBASIC15.48■□□□□ 0.07
Pcdha9Q91Y11 Gm22171-201ENSMUST00000179283 110 ntBASIC15.48■□□□□ 0.07
Pcdha9Q91Y11 Gm23936-201ENSMUST00000179354 110 ntBASIC15.48■□□□□ 0.07
Pcdha9Q91Y11 Gm22619-201ENSMUST00000179516 110 ntBASIC15.48■□□□□ 0.07
Pcdha9Q91Y11 Gm25255-201ENSMUST00000179579 110 ntBASIC15.48■□□□□ 0.07
Pcdha9Q91Y11 Gm24755-201ENSMUST00000179691 110 ntBASIC15.48■□□□□ 0.07
Pcdha9Q91Y11 Gm26506-201ENSMUST00000179692 110 ntBASIC15.48■□□□□ 0.07
Pcdha9Q91Y11 Gm25086-201ENSMUST00000179931 110 ntBASIC15.48■□□□□ 0.07
Pcdha9Q91Y11 Gm23243-201ENSMUST00000180047 110 ntBASIC15.48■□□□□ 0.07
Pcdha9Q91Y11 Gm24659-201ENSMUST00000180212 110 ntBASIC15.48■□□□□ 0.07
Pcdha9Q91Y11 Gm24169-201ENSMUST00000180244 110 ntBASIC15.48■□□□□ 0.07
Pcdha9Q91Y11 Gm23689-201ENSMUST00000180354 110 ntBASIC15.48■□□□□ 0.07
Pcdha9Q91Y11 Gm8116-201ENSMUST00000182917 1201 ntBASIC15.48■□□□□ 0.07
Pcdha9Q91Y11 Gm27359-201ENSMUST00000184153 110 ntBASIC15.48■□□□□ 0.07
Pcdha9Q91Y11 Gm27785-201ENSMUST00000184268 110 ntBASIC15.48■□□□□ 0.07
Pcdha9Q91Y11 Gm27466-201ENSMUST00000184396 110 ntBASIC15.48■□□□□ 0.07
Pcdha9Q91Y11 Gm27703-201ENSMUST00000184836 110 ntBASIC15.48■□□□□ 0.07
Pcdha9Q91Y11 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdha9Q91Y11 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdha9Q91Y11 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdha9Q91Y11 Gm10275-201ENSMUST00000092620 635 ntBASIC15.48■□□□□ 0.07
Pcdha9Q91Y11 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdha9Q91Y11 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdha9Q91Y11 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdha9Q91Y11 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdha9Q91Y11 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
Pcdha9Q91Y11 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdha9Q91Y11 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdha9Q91Y11 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdha9Q91Y11 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdha9Q91Y11 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdha9Q91Y11 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdha9Q91Y11 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdha9Q91Y11 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdha9Q91Y11 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdha9Q91Y11 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdha9Q91Y11 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Pcdha9Q91Y11 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC15.47■□□□□ 0.07
Pcdha9Q91Y11 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
Pcdha9Q91Y11 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
Pcdha9Q91Y11 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdha9Q91Y11 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdha9Q91Y11 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdha9Q91Y11 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdha9Q91Y11 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC15.47■□□□□ 0.07
Pcdha9Q91Y11 Gm6539-201ENSMUST00000119157 1064 ntBASIC15.47■□□□□ 0.07
Pcdha9Q91Y11 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdha9Q91Y11 Gm18049-201ENSMUST00000208909 581 ntBASIC15.47■□□□□ 0.07
Pcdha9Q91Y11 AC123645.1-201ENSMUST00000228469 605 ntBASIC15.47■□□□□ 0.07
Pcdha9Q91Y11 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdha9Q91Y11 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdha9Q91Y11 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdha9Q91Y11 Gm8396-201ENSMUST00000057361 823 ntBASIC15.47■□□□□ 0.07
Pcdha9Q91Y11 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdha9Q91Y11 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
Pcdha9Q91Y11 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdha9Q91Y11 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdha9Q91Y11 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Pcdha9Q91Y11 Gm9856-201ENSMUST00000217077 2578 ntBASIC15.47■□□□□ 0.07
Pcdha9Q91Y11 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdha9Q91Y11 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdha9Q91Y11 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms