Protein–RNA interactions for Protein: Q91Y08

Pcdhb1, Protocadherin beta 1, mousemouse

Predictions only

Length 818 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1Q91Y08 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhb1Q91Y08 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC15.15■□□□□ 0.02
Pcdhb1Q91Y08 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhb1Q91Y08 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhb1Q91Y08 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhb1Q91Y08 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhb1Q91Y08 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhb1Q91Y08 Gm9252-201ENSMUST00000172364 1602 ntBASIC15.15■□□□□ 0.02
Pcdhb1Q91Y08 Gm6973-201ENSMUST00000117080 721 ntBASIC15.15■□□□□ 0.02
Pcdhb1Q91Y08 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC15.15■□□□□ 0.02
Pcdhb1Q91Y08 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC15.15■□□□□ 0.02
Pcdhb1Q91Y08 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC15.15■□□□□ 0.02
Pcdhb1Q91Y08 Gm27920-201ENSMUST00000183953 96 ntBASIC15.15■□□□□ 0.02
Pcdhb1Q91Y08 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhb1Q91Y08 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhb1Q91Y08 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhb1Q91Y08 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhb1Q91Y08 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC15.15■□□□□ 0.02
Pcdhb1Q91Y08 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhb1Q91Y08 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhb1Q91Y08 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhb1Q91Y08 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhb1Q91Y08 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhb1Q91Y08 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhb1Q91Y08 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhb1Q91Y08 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhb1Q91Y08 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhb1Q91Y08 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhb1Q91Y08 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC15.15■□□□□ 0.02
Pcdhb1Q91Y08 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhb1Q91Y08 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhb1Q91Y08 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhb1Q91Y08 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhb1Q91Y08 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhb1Q91Y08 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC15.14■□□□□ 0.01
Pcdhb1Q91Y08 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhb1Q91Y08 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhb1Q91Y08 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Pcdhb1Q91Y08 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhb1Q91Y08 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Pcdhb1Q91Y08 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhb1Q91Y08 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC15.14■□□□□ 0.01
Pcdhb1Q91Y08 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC15.14■□□□□ 0.01
Pcdhb1Q91Y08 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhb1Q91Y08 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Pcdhb1Q91Y08 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhb1Q91Y08 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhb1Q91Y08 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC15.14■□□□□ 0.01
Pcdhb1Q91Y08 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC15.14■□□□□ 0.01
Pcdhb1Q91Y08 Gm11025-201ENSMUST00000140773 466 ntBASIC15.14■□□□□ 0.01
Pcdhb1Q91Y08 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC15.14■□□□□ 0.01
Pcdhb1Q91Y08 Gm5264-201ENSMUST00000190584 848 ntBASIC15.14■□□□□ 0.01
Pcdhb1Q91Y08 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC15.14■□□□□ 0.01
Pcdhb1Q91Y08 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhb1Q91Y08 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
Pcdhb1Q91Y08 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Pcdhb1Q91Y08 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Pcdhb1Q91Y08 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC15.14■□□□□ 0.01
Pcdhb1Q91Y08 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhb1Q91Y08 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhb1Q91Y08 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhb1Q91Y08 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhb1Q91Y08 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC15.14■□□□□ 0.01
Pcdhb1Q91Y08 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhb1Q91Y08 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhb1Q91Y08 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhb1Q91Y08 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Pcdhb1Q91Y08 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhb1Q91Y08 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhb1Q91Y08 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhb1Q91Y08 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhb1Q91Y08 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Pcdhb1Q91Y08 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhb1Q91Y08 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC15.13■□□□□ 0.01
Pcdhb1Q91Y08 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhb1Q91Y08 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhb1Q91Y08 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC15.13■□□□□ 0.01
Pcdhb1Q91Y08 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC15.13■□□□□ 0.01
Pcdhb1Q91Y08 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhb1Q91Y08 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC15.13■□□□□ 0.01
Pcdhb1Q91Y08 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC15.13■□□□□ 0.01
Pcdhb1Q91Y08 Gm8000-201ENSMUST00000188378 592 ntBASIC15.13■□□□□ 0.01
Pcdhb1Q91Y08 Gm5712-201ENSMUST00000199748 1043 ntBASIC15.13■□□□□ 0.01
Pcdhb1Q91Y08 Gm45612-201ENSMUST00000211320 160 ntBASIC15.13■□□□□ 0.01
Pcdhb1Q91Y08 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhb1Q91Y08 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhb1Q91Y08 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhb1Q91Y08 Gpr146-202ENSMUST00000053120 1040 ntBASIC15.13■□□□□ 0.01
Pcdhb1Q91Y08 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhb1Q91Y08 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Pcdhb1Q91Y08 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Pcdhb1Q91Y08 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhb1Q91Y08 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Pcdhb1Q91Y08 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Pcdhb1Q91Y08 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhb1Q91Y08 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhb1Q91Y08 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhb1Q91Y08 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Pcdhb1Q91Y08 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhb1Q91Y08 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms