Protein–RNA interactions for Protein: Q91Y06

Pcdhb13, Protocadherin beta 13, mousemouse

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb13Q91Y06 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdhb13Q91Y06 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdhb13Q91Y06 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
Pcdhb13Q91Y06 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdhb13Q91Y06 Gm43205-201ENSMUST00000198622 1968 ntBASIC14.7□□□□□ -0.06
Pcdhb13Q91Y06 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC14.7□□□□□ -0.06
Pcdhb13Q91Y06 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdhb13Q91Y06 Gm14451-201ENSMUST00000121581 1542 ntBASIC14.7□□□□□ -0.06
Pcdhb13Q91Y06 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdhb13Q91Y06 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdhb13Q91Y06 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdhb13Q91Y06 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdhb13Q91Y06 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdhb13Q91Y06 Sorbs3-204ENSMUST00000227929 2460 ntBASIC14.7□□□□□ -0.06
Pcdhb13Q91Y06 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdhb13Q91Y06 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdhb13Q91Y06 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Pcdhb13Q91Y06 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC14.7□□□□□ -0.06
Pcdhb13Q91Y06 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdhb13Q91Y06 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdhb13Q91Y06 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhb13Q91Y06 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhb13Q91Y06 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhb13Q91Y06 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhb13Q91Y06 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC14.69□□□□□ -0.06
Pcdhb13Q91Y06 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC14.69□□□□□ -0.06
Pcdhb13Q91Y06 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhb13Q91Y06 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhb13Q91Y06 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhb13Q91Y06 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC14.69□□□□□ -0.06
Pcdhb13Q91Y06 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhb13Q91Y06 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
Pcdhb13Q91Y06 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC14.69□□□□□ -0.06
Pcdhb13Q91Y06 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC14.69□□□□□ -0.06
Pcdhb13Q91Y06 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhb13Q91Y06 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhb13Q91Y06 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC14.69□□□□□ -0.06
Pcdhb13Q91Y06 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC14.69□□□□□ -0.06
Pcdhb13Q91Y06 Gm12260-201ENSMUST00000122447 411 ntBASIC14.69□□□□□ -0.06
Pcdhb13Q91Y06 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhb13Q91Y06 Mir8117-201ENSMUST00000184773 107 ntBASIC14.69□□□□□ -0.06
Pcdhb13Q91Y06 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhb13Q91Y06 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhb13Q91Y06 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC14.69□□□□□ -0.06
Pcdhb13Q91Y06 CT025555.1-201ENSMUST00000225901 1217 ntBASIC14.69□□□□□ -0.06
Pcdhb13Q91Y06 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhb13Q91Y06 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhb13Q91Y06 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhb13Q91Y06 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhb13Q91Y06 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Pcdhb13Q91Y06 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhb13Q91Y06 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhb13Q91Y06 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC14.69□□□□□ -0.06
Pcdhb13Q91Y06 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Pcdhb13Q91Y06 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC14.69□□□□□ -0.06
Pcdhb13Q91Y06 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhb13Q91Y06 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Pcdhb13Q91Y06 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhb13Q91Y06 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC14.68□□□□□ -0.06
Pcdhb13Q91Y06 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Pcdhb13Q91Y06 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhb13Q91Y06 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhb13Q91Y06 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhb13Q91Y06 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhb13Q91Y06 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhb13Q91Y06 Gm45546-201ENSMUST00000211053 2394 ntBASIC14.68□□□□□ -0.06
Pcdhb13Q91Y06 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhb13Q91Y06 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhb13Q91Y06 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC14.68□□□□□ -0.06
Pcdhb13Q91Y06 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhb13Q91Y06 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Pcdhb13Q91Y06 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC14.68□□□□□ -0.06
Pcdhb13Q91Y06 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC14.68□□□□□ -0.06
Pcdhb13Q91Y06 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Pcdhb13Q91Y06 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC14.68□□□□□ -0.06
Pcdhb13Q91Y06 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
Pcdhb13Q91Y06 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC14.68□□□□□ -0.06
Pcdhb13Q91Y06 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC14.68□□□□□ -0.06
Pcdhb13Q91Y06 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC14.68□□□□□ -0.06
Pcdhb13Q91Y06 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhb13Q91Y06 Gm18206-201ENSMUST00000207027 926 ntBASIC14.68□□□□□ -0.06
Pcdhb13Q91Y06 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC14.68□□□□□ -0.06
Pcdhb13Q91Y06 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC14.68□□□□□ -0.06
Pcdhb13Q91Y06 AC161424.1-202ENSMUST00000213570 767 ntTSL 3 BASIC14.68□□□□□ -0.06
Pcdhb13Q91Y06 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC14.68□□□□□ -0.06
Pcdhb13Q91Y06 AC090659.1-201ENSMUST00000224334 768 ntBASIC14.68□□□□□ -0.06
Pcdhb13Q91Y06 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhb13Q91Y06 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhb13Q91Y06 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Pcdhb13Q91Y06 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhb13Q91Y06 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhb13Q91Y06 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Pcdhb13Q91Y06 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhb13Q91Y06 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhb13Q91Y06 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Pcdhb13Q91Y06 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC14.68□□□□□ -0.06
Pcdhb13Q91Y06 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhb13Q91Y06 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC14.67□□□□□ -0.06
Pcdhb13Q91Y06 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhb13Q91Y06 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms