Protein–RNA interactions for Protein: Q91Y02

Pcdhb18, Protocadherin beta-18, mousemouse

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb18Q91Y02 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhb18Q91Y02 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhb18Q91Y02 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhb18Q91Y02 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhb18Q91Y02 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhb18Q91Y02 Gm24543-201ENSMUST00000103867 82 ntBASIC15.24■□□□□ 0.03
Pcdhb18Q91Y02 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC15.24■□□□□ 0.03
Pcdhb18Q91Y02 Gm14719-201ENSMUST00000121891 340 ntBASIC15.24■□□□□ 0.03
Pcdhb18Q91Y02 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC15.24■□□□□ 0.03
Pcdhb18Q91Y02 Gm15487-201ENSMUST00000122373 465 ntBASIC15.24■□□□□ 0.03
Pcdhb18Q91Y02 Gm16215-201ENSMUST00000161990 637 ntBASIC15.24■□□□□ 0.03
Pcdhb18Q91Y02 Gm9719-201ENSMUST00000162765 543 ntBASIC15.24■□□□□ 0.03
Pcdhb18Q91Y02 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhb18Q91Y02 H2-Pa-201ENSMUST00000182803 626 ntBASIC15.24■□□□□ 0.03
Pcdhb18Q91Y02 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC15.24■□□□□ 0.03
Pcdhb18Q91Y02 Gm7775-201ENSMUST00000218871 853 ntBASIC15.24■□□□□ 0.03
Pcdhb18Q91Y02 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhb18Q91Y02 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhb18Q91Y02 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhb18Q91Y02 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhb18Q91Y02 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhb18Q91Y02 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhb18Q91Y02 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhb18Q91Y02 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC15.24■□□□□ 0.03
Pcdhb18Q91Y02 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhb18Q91Y02 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhb18Q91Y02 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhb18Q91Y02 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhb18Q91Y02 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhb18Q91Y02 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhb18Q91Y02 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhb18Q91Y02 Gtpbp10-211ENSMUST00000198799 648 ntBASIC15.23■□□□□ 0.03
Pcdhb18Q91Y02 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Pcdhb18Q91Y02 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
Pcdhb18Q91Y02 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhb18Q91Y02 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhb18Q91Y02 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Pcdhb18Q91Y02 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhb18Q91Y02 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhb18Q91Y02 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Pcdhb18Q91Y02 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhb18Q91Y02 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhb18Q91Y02 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhb18Q91Y02 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhb18Q91Y02 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhb18Q91Y02 Syt7-205ENSMUST00000224135 1557 ntBASIC15.23■□□□□ 0.03
Pcdhb18Q91Y02 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhb18Q91Y02 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhb18Q91Y02 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhb18Q91Y02 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhb18Q91Y02 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhb18Q91Y02 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhb18Q91Y02 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Pcdhb18Q91Y02 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhb18Q91Y02 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Pcdhb18Q91Y02 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhb18Q91Y02 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhb18Q91Y02 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC15.22■□□□□ 0.03
Pcdhb18Q91Y02 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Pcdhb18Q91Y02 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC15.22■□□□□ 0.03
Pcdhb18Q91Y02 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhb18Q91Y02 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhb18Q91Y02 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhb18Q91Y02 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhb18Q91Y02 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhb18Q91Y02 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhb18Q91Y02 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhb18Q91Y02 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC15.22■□□□□ 0.03
Pcdhb18Q91Y02 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhb18Q91Y02 Gm7488-201ENSMUST00000117148 684 ntBASIC15.22■□□□□ 0.03
Pcdhb18Q91Y02 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhb18Q91Y02 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhb18Q91Y02 Gm6944-201ENSMUST00000182449 1006 ntBASIC15.22■□□□□ 0.03
Pcdhb18Q91Y02 Gm27838-201ENSMUST00000184829 128 ntBASIC15.22■□□□□ 0.03
Pcdhb18Q91Y02 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC15.22■□□□□ 0.03
Pcdhb18Q91Y02 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC15.22■□□□□ 0.03
Pcdhb18Q91Y02 AC132863.2-201ENSMUST00000226643 799 ntBASIC15.22■□□□□ 0.03
Pcdhb18Q91Y02 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhb18Q91Y02 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Pcdhb18Q91Y02 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhb18Q91Y02 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhb18Q91Y02 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhb18Q91Y02 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhb18Q91Y02 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Pcdhb18Q91Y02 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhb18Q91Y02 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhb18Q91Y02 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhb18Q91Y02 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC15.22■□□□□ 0.03
Pcdhb18Q91Y02 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhb18Q91Y02 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdhb18Q91Y02 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Pcdhb18Q91Y02 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdhb18Q91Y02 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Pcdhb18Q91Y02 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdhb18Q91Y02 Syt7-204ENSMUST00000223586 1344 ntBASIC15.21■□□□□ 0.03
Pcdhb18Q91Y02 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC15.21■□□□□ 0.03
Pcdhb18Q91Y02 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdhb18Q91Y02 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdhb18Q91Y02 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Pcdhb18Q91Y02 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC15.21■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms