Protein–RNA interactions for Protein: Q91XY8

Pcdhga11, Protocadherin gamma A11, mousemouse

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga11Q91XY8 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdhga11Q91XY8 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
Pcdhga11Q91XY8 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdhga11Q91XY8 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdhga11Q91XY8 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Pcdhga11Q91XY8 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC14.11□□□□□ -0.15
Pcdhga11Q91XY8 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdhga11Q91XY8 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdhga11Q91XY8 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC14.11□□□□□ -0.15
Pcdhga11Q91XY8 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC14.11□□□□□ -0.15
Pcdhga11Q91XY8 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC14.11□□□□□ -0.15
Pcdhga11Q91XY8 AC132104.2-201ENSMUST00000215011 266 ntBASIC14.11□□□□□ -0.15
Pcdhga11Q91XY8 AC164107.1-201ENSMUST00000227730 2161 ntBASIC14.11□□□□□ -0.15
Pcdhga11Q91XY8 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Pcdhga11Q91XY8 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdhga11Q91XY8 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdhga11Q91XY8 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdhga11Q91XY8 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdhga11Q91XY8 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdhga11Q91XY8 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdhga11Q91XY8 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdhga11Q91XY8 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdhga11Q91XY8 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdhga11Q91XY8 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Pcdhga11Q91XY8 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdhga11Q91XY8 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC14.11□□□□□ -0.15
Pcdhga11Q91XY8 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Pcdhga11Q91XY8 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdhga11Q91XY8 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Pcdhga11Q91XY8 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC14.1□□□□□ -0.15
Pcdhga11Q91XY8 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdhga11Q91XY8 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdhga11Q91XY8 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdhga11Q91XY8 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdhga11Q91XY8 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdhga11Q91XY8 Gm42632-201ENSMUST00000201707 2411 ntBASIC14.1□□□□□ -0.15
Pcdhga11Q91XY8 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Pcdhga11Q91XY8 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Pcdhga11Q91XY8 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdhga11Q91XY8 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC14.1□□□□□ -0.15
Pcdhga11Q91XY8 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC14.1□□□□□ -0.15
Pcdhga11Q91XY8 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdhga11Q91XY8 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdhga11Q91XY8 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC14.1□□□□□ -0.15
Pcdhga11Q91XY8 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdhga11Q91XY8 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdhga11Q91XY8 AC154222.1-201ENSMUST00000223882 475 ntBASIC14.1□□□□□ -0.15
Pcdhga11Q91XY8 Gm5867-201ENSMUST00000063197 592 ntBASIC14.1□□□□□ -0.15
Pcdhga11Q91XY8 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdhga11Q91XY8 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdhga11Q91XY8 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdhga11Q91XY8 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdhga11Q91XY8 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdhga11Q91XY8 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdhga11Q91XY8 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdhga11Q91XY8 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdhga11Q91XY8 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdhga11Q91XY8 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdhga11Q91XY8 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC14.09□□□□□ -0.15
Pcdhga11Q91XY8 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdhga11Q91XY8 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC14.09□□□□□ -0.15
Pcdhga11Q91XY8 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdhga11Q91XY8 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdhga11Q91XY8 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdhga11Q91XY8 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdhga11Q91XY8 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdhga11Q91XY8 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Pcdhga11Q91XY8 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
Pcdhga11Q91XY8 Gm14140-201ENSMUST00000119999 995 ntBASIC14.09□□□□□ -0.15
Pcdhga11Q91XY8 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
Pcdhga11Q91XY8 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdhga11Q91XY8 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Pcdhga11Q91XY8 Gm27300-201ENSMUST00000184085 97 ntBASIC14.09□□□□□ -0.15
Pcdhga11Q91XY8 Gm27335-201ENSMUST00000184758 97 ntBASIC14.09□□□□□ -0.15
Pcdhga11Q91XY8 Gm27628-201ENSMUST00000184911 107 ntBASIC14.09□□□□□ -0.15
Pcdhga11Q91XY8 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdhga11Q91XY8 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC14.09□□□□□ -0.15
Pcdhga11Q91XY8 Gm37935-201ENSMUST00000192012 982 ntBASIC14.09□□□□□ -0.15
Pcdhga11Q91XY8 Gm43073-201ENSMUST00000198200 1189 ntBASIC14.09□□□□□ -0.15
Pcdhga11Q91XY8 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdhga11Q91XY8 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC14.09□□□□□ -0.15
Pcdhga11Q91XY8 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdhga11Q91XY8 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdhga11Q91XY8 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdhga11Q91XY8 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdhga11Q91XY8 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdhga11Q91XY8 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdhga11Q91XY8 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdhga11Q91XY8 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdhga11Q91XY8 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdhga11Q91XY8 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdhga11Q91XY8 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdhga11Q91XY8 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC14.09□□□□□ -0.15
Pcdhga11Q91XY8 Gm8096-201ENSMUST00000209921 1591 ntBASIC14.09□□□□□ -0.15
Pcdhga11Q91XY8 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC14.08□□□□□ -0.15
Pcdhga11Q91XY8 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
Pcdhga11Q91XY8 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Pcdhga11Q91XY8 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Pcdhga11Q91XY8 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Pcdhga11Q91XY8 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC14.08□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 45.3 ms