Protein–RNA interactions for Protein: Q91XB0

Trex1, Three-prime repair exonuclease 1, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trex1Q91XB0 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Trex1Q91XB0 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trex1Q91XB0 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trex1Q91XB0 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Trex1Q91XB0 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trex1Q91XB0 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC16.65■□□□□ 0.26
Trex1Q91XB0 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trex1Q91XB0 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trex1Q91XB0 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Trex1Q91XB0 AC174678.1-201ENSMUST00000228007 2749 ntBASIC16.65■□□□□ 0.26
Trex1Q91XB0 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trex1Q91XB0 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Trex1Q91XB0 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trex1Q91XB0 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trex1Q91XB0 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Trex1Q91XB0 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.26
Trex1Q91XB0 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Trex1Q91XB0 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trex1Q91XB0 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trex1Q91XB0 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trex1Q91XB0 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trex1Q91XB0 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Trex1Q91XB0 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
Trex1Q91XB0 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC16.64■□□□□ 0.25
Trex1Q91XB0 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC16.64■□□□□ 0.25
Trex1Q91XB0 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC16.64■□□□□ 0.25
Trex1Q91XB0 Gm10766-202ENSMUST00000194123 606 ntBASIC16.64■□□□□ 0.25
Trex1Q91XB0 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Trex1Q91XB0 Gm6745-201ENSMUST00000199216 526 ntBASIC16.64■□□□□ 0.25
Trex1Q91XB0 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC16.64■□□□□ 0.25
Trex1Q91XB0 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Trex1Q91XB0 AC154239.3-201ENSMUST00000226933 674 ntBASIC16.64■□□□□ 0.25
Trex1Q91XB0 Gm9797-201ENSMUST00000052902 613 ntBASIC16.64■□□□□ 0.25
Trex1Q91XB0 Gm6180-201ENSMUST00000065243 498 ntBASIC16.64■□□□□ 0.25
Trex1Q91XB0 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trex1Q91XB0 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trex1Q91XB0 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trex1Q91XB0 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Trex1Q91XB0 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Trex1Q91XB0 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Trex1Q91XB0 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trex1Q91XB0 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trex1Q91XB0 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Trex1Q91XB0 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trex1Q91XB0 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trex1Q91XB0 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trex1Q91XB0 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.25
Trex1Q91XB0 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Trex1Q91XB0 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC16.64■□□□□ 0.25
Trex1Q91XB0 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trex1Q91XB0 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Trex1Q91XB0 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trex1Q91XB0 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trex1Q91XB0 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC16.63■□□□□ 0.25
Trex1Q91XB0 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Trex1Q91XB0 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trex1Q91XB0 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Trex1Q91XB0 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trex1Q91XB0 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trex1Q91XB0 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Trex1Q91XB0 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trex1Q91XB0 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trex1Q91XB0 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trex1Q91XB0 Gm6912-201ENSMUST00000117218 544 ntBASIC16.63■□□□□ 0.25
Trex1Q91XB0 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Trex1Q91XB0 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Trex1Q91XB0 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Trex1Q91XB0 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC16.63■□□□□ 0.25
Trex1Q91XB0 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Trex1Q91XB0 Gm33320-201ENSMUST00000192232 530 ntBASIC16.63■□□□□ 0.25
Trex1Q91XB0 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC16.63■□□□□ 0.25
Trex1Q91XB0 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Trex1Q91XB0 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC16.63■□□□□ 0.25
Trex1Q91XB0 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trex1Q91XB0 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC16.63■□□□□ 0.25
Trex1Q91XB0 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Trex1Q91XB0 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trex1Q91XB0 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Trex1Q91XB0 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC16.63■□□□□ 0.25
Trex1Q91XB0 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Trex1Q91XB0 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Trex1Q91XB0 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Trex1Q91XB0 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Trex1Q91XB0 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trex1Q91XB0 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Trex1Q91XB0 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trex1Q91XB0 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trex1Q91XB0 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trex1Q91XB0 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trex1Q91XB0 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Trex1Q91XB0 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trex1Q91XB0 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Trex1Q91XB0 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Trex1Q91XB0 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trex1Q91XB0 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trex1Q91XB0 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trex1Q91XB0 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trex1Q91XB0 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trex1Q91XB0 Gm28760-201ENSMUST00000185995 736 ntBASIC16.62■□□□□ 0.25
Trex1Q91XB0 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms