Protein–RNA interactions for Protein: Q91V10

Vsx1, Visual system homeobox 1, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx1Q91V10 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Vsx1Q91V10 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Vsx1Q91V10 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Vsx1Q91V10 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Vsx1Q91V10 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Vsx1Q91V10 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Vsx1Q91V10 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Vsx1Q91V10 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Vsx1Q91V10 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Vsx1Q91V10 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.11
Vsx1Q91V10 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.11
Vsx1Q91V10 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Vsx1Q91V10 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Vsx1Q91V10 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Vsx1Q91V10 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
Vsx1Q91V10 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
Vsx1Q91V10 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Vsx1Q91V10 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Vsx1Q91V10 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC14.39□□□□□ -0.11
Vsx1Q91V10 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC14.39□□□□□ -0.11
Vsx1Q91V10 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
Vsx1Q91V10 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC14.39□□□□□ -0.11
Vsx1Q91V10 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC14.39□□□□□ -0.11
Vsx1Q91V10 Gm11918-201ENSMUST00000121660 179 ntBASIC14.39□□□□□ -0.11
Vsx1Q91V10 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC14.39□□□□□ -0.11
Vsx1Q91V10 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC14.39□□□□□ -0.11
Vsx1Q91V10 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Vsx1Q91V10 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Vsx1Q91V10 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Vsx1Q91V10 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Vsx1Q91V10 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Vsx1Q91V10 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Vsx1Q91V10 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Vsx1Q91V10 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Vsx1Q91V10 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Vsx1Q91V10 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Vsx1Q91V10 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Vsx1Q91V10 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Vsx1Q91V10 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC14.39□□□□□ -0.11
Vsx1Q91V10 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Vsx1Q91V10 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Vsx1Q91V10 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC14.39□□□□□ -0.11
Vsx1Q91V10 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Vsx1Q91V10 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Vsx1Q91V10 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Vsx1Q91V10 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Vsx1Q91V10 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Vsx1Q91V10 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Vsx1Q91V10 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC14.38□□□□□ -0.11
Vsx1Q91V10 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Vsx1Q91V10 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Vsx1Q91V10 Gm11425-201ENSMUST00000119608 498 ntBASIC14.38□□□□□ -0.11
Vsx1Q91V10 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC14.38□□□□□ -0.11
Vsx1Q91V10 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Vsx1Q91V10 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Vsx1Q91V10 AC164567.1-201ENSMUST00000219185 960 ntBASIC14.38□□□□□ -0.11
Vsx1Q91V10 Gm18624-201ENSMUST00000220966 658 ntBASIC14.38□□□□□ -0.11
Vsx1Q91V10 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Vsx1Q91V10 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Vsx1Q91V10 Gm9396-201ENSMUST00000076703 567 ntBASIC14.38□□□□□ -0.11
Vsx1Q91V10 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC14.38□□□□□ -0.11
Vsx1Q91V10 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Vsx1Q91V10 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Vsx1Q91V10 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Vsx1Q91V10 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Vsx1Q91V10 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Vsx1Q91V10 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Vsx1Q91V10 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
Vsx1Q91V10 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Vsx1Q91V10 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Vsx1Q91V10 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Vsx1Q91V10 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Vsx1Q91V10 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Vsx1Q91V10 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
Vsx1Q91V10 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Vsx1Q91V10 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vsx1Q91V10 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vsx1Q91V10 Gm6756-201ENSMUST00000180647 1620 ntBASIC14.37□□□□□ -0.11
Vsx1Q91V10 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vsx1Q91V10 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Vsx1Q91V10 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vsx1Q91V10 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vsx1Q91V10 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vsx1Q91V10 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vsx1Q91V10 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vsx1Q91V10 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vsx1Q91V10 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vsx1Q91V10 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vsx1Q91V10 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC14.37□□□□□ -0.11
Vsx1Q91V10 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC14.37□□□□□ -0.11
Vsx1Q91V10 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Vsx1Q91V10 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC14.37□□□□□ -0.11
Vsx1Q91V10 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC14.37□□□□□ -0.11
Vsx1Q91V10 Gm10766-202ENSMUST00000194123 606 ntBASIC14.37□□□□□ -0.11
Vsx1Q91V10 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vsx1Q91V10 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC14.37□□□□□ -0.11
Vsx1Q91V10 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vsx1Q91V10 CT009510.1-201ENSMUST00000227972 270 ntBASIC14.37□□□□□ -0.11
Vsx1Q91V10 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vsx1Q91V10 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 11.4 ms