Protein–RNA interactions for Protein: Q91V04

Tram1, Translocating chain-associated membrane protein 1, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tram1Q91V04 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tram1Q91V04 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tram1Q91V04 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tram1Q91V04 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Tram1Q91V04 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tram1Q91V04 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC12.55□□□□□ -0.4
Tram1Q91V04 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tram1Q91V04 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tram1Q91V04 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tram1Q91V04 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tram1Q91V04 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tram1Q91V04 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Tram1Q91V04 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC12.55□□□□□ -0.4
Tram1Q91V04 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tram1Q91V04 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tram1Q91V04 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tram1Q91V04 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tram1Q91V04 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tram1Q91V04 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tram1Q91V04 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tram1Q91V04 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tram1Q91V04 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Tram1Q91V04 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tram1Q91V04 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC12.54□□□□□ -0.4
Tram1Q91V04 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Tram1Q91V04 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC12.54□□□□□ -0.4
Tram1Q91V04 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tram1Q91V04 Gm15165-201ENSMUST00000118140 502 ntBASIC12.54□□□□□ -0.4
Tram1Q91V04 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC12.54□□□□□ -0.4
Tram1Q91V04 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tram1Q91V04 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC12.54□□□□□ -0.4
Tram1Q91V04 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tram1Q91V04 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC12.54□□□□□ -0.4
Tram1Q91V04 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tram1Q91V04 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tram1Q91V04 Gm18244-201ENSMUST00000219747 1566 ntBASIC12.54□□□□□ -0.4
Tram1Q91V04 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Tram1Q91V04 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tram1Q91V04 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tram1Q91V04 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tram1Q91V04 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tram1Q91V04 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tram1Q91V04 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tram1Q91V04 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tram1Q91V04 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Tram1Q91V04 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Tram1Q91V04 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Tram1Q91V04 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tram1Q91V04 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tram1Q91V04 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tram1Q91V04 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Tram1Q91V04 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Tram1Q91V04 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tram1Q91V04 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tram1Q91V04 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tram1Q91V04 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Tram1Q91V04 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tram1Q91V04 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC12.53□□□□□ -0.4
Tram1Q91V04 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC12.53□□□□□ -0.4
Tram1Q91V04 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC12.53□□□□□ -0.4
Tram1Q91V04 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tram1Q91V04 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Tram1Q91V04 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Tram1Q91V04 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tram1Q91V04 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC12.53□□□□□ -0.4
Tram1Q91V04 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tram1Q91V04 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tram1Q91V04 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tram1Q91V04 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tram1Q91V04 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tram1Q91V04 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC12.53□□□□□ -0.4
Tram1Q91V04 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tram1Q91V04 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Tram1Q91V04 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Tram1Q91V04 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Tram1Q91V04 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Tram1Q91V04 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Tram1Q91V04 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC12.52□□□□□ -0.4
Tram1Q91V04 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Tram1Q91V04 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Tram1Q91V04 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Tram1Q91V04 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Tram1Q91V04 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Tram1Q91V04 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Tram1Q91V04 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Tram1Q91V04 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Tram1Q91V04 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Tram1Q91V04 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Tram1Q91V04 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Tram1Q91V04 Gm43056-201ENSMUST00000197865 2791 ntBASIC12.52□□□□□ -0.41
Tram1Q91V04 Trav13-3-201ENSMUST00000117226 336 ntBASIC12.52□□□□□ -0.41
Tram1Q91V04 Gm6433-201ENSMUST00000118634 875 ntBASIC12.52□□□□□ -0.41
Tram1Q91V04 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC12.52□□□□□ -0.41
Tram1Q91V04 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC12.52□□□□□ -0.41
Tram1Q91V04 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Tram1Q91V04 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Tram1Q91V04 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Tram1Q91V04 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC12.52□□□□□ -0.41
Tram1Q91V04 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Tram1Q91V04 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms