Protein–RNA interactions for Protein: Q8VIM6

Strc, Stereocilin, mousemouse

Predictions only

Length 1,809 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
StrcQ8VIM6 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC17■□□□□ 0.31
StrcQ8VIM6 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC17■□□□□ 0.31
StrcQ8VIM6 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
StrcQ8VIM6 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
StrcQ8VIM6 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
StrcQ8VIM6 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
StrcQ8VIM6 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
StrcQ8VIM6 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC17■□□□□ 0.31
StrcQ8VIM6 Gm22323-201ENSMUST00000103832 109 ntBASIC17■□□□□ 0.31
StrcQ8VIM6 Gm12176-201ENSMUST00000121420 875 ntBASIC17■□□□□ 0.31
StrcQ8VIM6 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC17■□□□□ 0.31
StrcQ8VIM6 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC17■□□□□ 0.31
StrcQ8VIM6 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC17■□□□□ 0.31
StrcQ8VIM6 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC17■□□□□ 0.31
StrcQ8VIM6 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
StrcQ8VIM6 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
StrcQ8VIM6 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
StrcQ8VIM6 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
StrcQ8VIM6 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
StrcQ8VIM6 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
StrcQ8VIM6 Gm7993-201ENSMUST00000200970 1384 ntBASIC16.99■□□□□ 0.31
StrcQ8VIM6 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
StrcQ8VIM6 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
StrcQ8VIM6 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC16.99■□□□□ 0.31
StrcQ8VIM6 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC16.99■□□□□ 0.31
StrcQ8VIM6 Gm7895-201ENSMUST00000187459 1173 ntBASIC16.99■□□□□ 0.31
StrcQ8VIM6 Prob1-201ENSMUST00000097619 3021 ntBASIC16.99■□□□□ 0.31
StrcQ8VIM6 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
StrcQ8VIM6 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
StrcQ8VIM6 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
StrcQ8VIM6 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
StrcQ8VIM6 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
StrcQ8VIM6 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
StrcQ8VIM6 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
StrcQ8VIM6 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
StrcQ8VIM6 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC16.98■□□□□ 0.31
StrcQ8VIM6 Gm11658-201ENSMUST00000120913 1008 ntBASIC16.98■□□□□ 0.31
StrcQ8VIM6 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
StrcQ8VIM6 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
StrcQ8VIM6 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
StrcQ8VIM6 Gm2467-201ENSMUST00000182266 1010 ntBASIC16.98■□□□□ 0.31
StrcQ8VIM6 Gm6981-201ENSMUST00000182467 1008 ntBASIC16.98■□□□□ 0.31
StrcQ8VIM6 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
StrcQ8VIM6 Gm29396-201ENSMUST00000185659 716 ntBASIC16.98■□□□□ 0.31
StrcQ8VIM6 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
StrcQ8VIM6 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
StrcQ8VIM6 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
StrcQ8VIM6 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
StrcQ8VIM6 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
StrcQ8VIM6 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
StrcQ8VIM6 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
StrcQ8VIM6 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
StrcQ8VIM6 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
StrcQ8VIM6 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
StrcQ8VIM6 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
StrcQ8VIM6 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
StrcQ8VIM6 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC16.98■□□□□ 0.31
StrcQ8VIM6 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
StrcQ8VIM6 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
StrcQ8VIM6 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
StrcQ8VIM6 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
StrcQ8VIM6 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
StrcQ8VIM6 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
StrcQ8VIM6 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC16.98■□□□□ 0.31
StrcQ8VIM6 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
StrcQ8VIM6 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
StrcQ8VIM6 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC16.98■□□□□ 0.31
StrcQ8VIM6 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
StrcQ8VIM6 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
StrcQ8VIM6 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC16.97■□□□□ 0.31
StrcQ8VIM6 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
StrcQ8VIM6 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
StrcQ8VIM6 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC16.97■□□□□ 0.31
StrcQ8VIM6 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
StrcQ8VIM6 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
StrcQ8VIM6 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC16.97■□□□□ 0.31
StrcQ8VIM6 Gm26927-201ENSMUST00000182385 965 ntBASIC16.97■□□□□ 0.31
StrcQ8VIM6 Gm38000-201ENSMUST00000192390 1215 ntBASIC16.97■□□□□ 0.31
StrcQ8VIM6 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC16.97■□□□□ 0.31
StrcQ8VIM6 AC132317.1-201ENSMUST00000227227 962 ntBASIC16.97■□□□□ 0.31
StrcQ8VIM6 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
StrcQ8VIM6 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC16.97■□□□□ 0.31
StrcQ8VIM6 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
StrcQ8VIM6 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
StrcQ8VIM6 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
StrcQ8VIM6 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
StrcQ8VIM6 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC16.97■□□□□ 0.31
StrcQ8VIM6 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
StrcQ8VIM6 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
StrcQ8VIM6 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC16.97■□□□□ 0.31
StrcQ8VIM6 Gm12846-201ENSMUST00000120431 1373 ntBASIC16.97■□□□□ 0.31
StrcQ8VIM6 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC16.97■□□□□ 0.31
StrcQ8VIM6 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
StrcQ8VIM6 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
StrcQ8VIM6 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC16.96■□□□□ 0.31
StrcQ8VIM6 Gm45865-201ENSMUST00000211815 945 ntBASIC16.96■□□□□ 0.31
StrcQ8VIM6 AC155637.1-201ENSMUST00000218560 636 ntBASIC16.96■□□□□ 0.31
StrcQ8VIM6 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
StrcQ8VIM6 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
StrcQ8VIM6 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms