Protein–RNA interactions for Protein: Q8VIK3

H1foo, Histone H1oo, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H1fooQ8VIK3 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC12.22□□□□□ -0.45
H1fooQ8VIK3 Gm23547-201ENSMUST00000158210 271 ntBASIC12.22□□□□□ -0.45
H1fooQ8VIK3 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC12.22□□□□□ -0.45
H1fooQ8VIK3 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC12.22□□□□□ -0.45
H1fooQ8VIK3 Gm8597-201ENSMUST00000191525 1109 ntBASIC12.22□□□□□ -0.45
H1fooQ8VIK3 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC12.22□□□□□ -0.45
H1fooQ8VIK3 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC12.22□□□□□ -0.45
H1fooQ8VIK3 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
H1fooQ8VIK3 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
H1fooQ8VIK3 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
H1fooQ8VIK3 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC12.22□□□□□ -0.45
H1fooQ8VIK3 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC12.22□□□□□ -0.45
H1fooQ8VIK3 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
H1fooQ8VIK3 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
H1fooQ8VIK3 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC12.22□□□□□ -0.45
H1fooQ8VIK3 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
H1fooQ8VIK3 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
H1fooQ8VIK3 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
H1fooQ8VIK3 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
H1fooQ8VIK3 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
H1fooQ8VIK3 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC12.22□□□□□ -0.45
H1fooQ8VIK3 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
H1fooQ8VIK3 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
H1fooQ8VIK3 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
H1fooQ8VIK3 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
H1fooQ8VIK3 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
H1fooQ8VIK3 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
H1fooQ8VIK3 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC12.21□□□□□ -0.45
H1fooQ8VIK3 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
H1fooQ8VIK3 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC12.21□□□□□ -0.45
H1fooQ8VIK3 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
H1fooQ8VIK3 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC12.21□□□□□ -0.45
H1fooQ8VIK3 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
H1fooQ8VIK3 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
H1fooQ8VIK3 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
H1fooQ8VIK3 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC12.21□□□□□ -0.45
H1fooQ8VIK3 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
H1fooQ8VIK3 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
H1fooQ8VIK3 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC12.21□□□□□ -0.45
H1fooQ8VIK3 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
H1fooQ8VIK3 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC12.21□□□□□ -0.45
H1fooQ8VIK3 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
H1fooQ8VIK3 Gm9726-201ENSMUST00000180321 678 ntBASIC12.21□□□□□ -0.45
H1fooQ8VIK3 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
H1fooQ8VIK3 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
H1fooQ8VIK3 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC12.21□□□□□ -0.45
H1fooQ8VIK3 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC12.21□□□□□ -0.45
H1fooQ8VIK3 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC12.21□□□□□ -0.45
H1fooQ8VIK3 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
H1fooQ8VIK3 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
H1fooQ8VIK3 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
H1fooQ8VIK3 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC12.21□□□□□ -0.46
H1fooQ8VIK3 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
H1fooQ8VIK3 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
H1fooQ8VIK3 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
H1fooQ8VIK3 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
H1fooQ8VIK3 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
H1fooQ8VIK3 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
H1fooQ8VIK3 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
H1fooQ8VIK3 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
H1fooQ8VIK3 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
H1fooQ8VIK3 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC12.2□□□□□ -0.46
H1fooQ8VIK3 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC12.2□□□□□ -0.46
H1fooQ8VIK3 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
H1fooQ8VIK3 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
H1fooQ8VIK3 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
H1fooQ8VIK3 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC12.2□□□□□ -0.46
H1fooQ8VIK3 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
H1fooQ8VIK3 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
H1fooQ8VIK3 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
H1fooQ8VIK3 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
H1fooQ8VIK3 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC12.2□□□□□ -0.46
H1fooQ8VIK3 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC12.2□□□□□ -0.46
H1fooQ8VIK3 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
H1fooQ8VIK3 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
H1fooQ8VIK3 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC12.2□□□□□ -0.46
H1fooQ8VIK3 Gm13464-201ENSMUST00000119418 935 ntBASIC12.2□□□□□ -0.46
H1fooQ8VIK3 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
H1fooQ8VIK3 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
H1fooQ8VIK3 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC12.2□□□□□ -0.46
H1fooQ8VIK3 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC12.2□□□□□ -0.46
H1fooQ8VIK3 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC12.2□□□□□ -0.46
H1fooQ8VIK3 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC12.2□□□□□ -0.46
H1fooQ8VIK3 Thap2-203ENSMUST00000218989 527 ntBASIC12.2□□□□□ -0.46
H1fooQ8VIK3 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
H1fooQ8VIK3 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC12.2□□□□□ -0.46
H1fooQ8VIK3 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
H1fooQ8VIK3 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
H1fooQ8VIK3 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
H1fooQ8VIK3 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
H1fooQ8VIK3 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC12.2□□□□□ -0.46
H1fooQ8VIK3 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
H1fooQ8VIK3 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
H1fooQ8VIK3 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
H1fooQ8VIK3 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
H1fooQ8VIK3 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
H1fooQ8VIK3 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
H1fooQ8VIK3 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
H1fooQ8VIK3 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
H1fooQ8VIK3 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms