Protein–RNA interactions for Protein: Q8VI88

Odf4, Outer dense fiber protein 4, mousemouse

Predictions only

Length 290 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Odf4Q8VI88 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Odf4Q8VI88 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Odf4Q8VI88 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Odf4Q8VI88 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC13.09□□□□□ -0.31
Odf4Q8VI88 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Odf4Q8VI88 Gm26308-201ENSMUST00000157768 69 ntBASIC13.09□□□□□ -0.31
Odf4Q8VI88 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Odf4Q8VI88 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Odf4Q8VI88 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Odf4Q8VI88 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Odf4Q8VI88 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Odf4Q8VI88 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Odf4Q8VI88 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Odf4Q8VI88 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Odf4Q8VI88 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Odf4Q8VI88 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Odf4Q8VI88 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Odf4Q8VI88 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC13.09□□□□□ -0.31
Odf4Q8VI88 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Odf4Q8VI88 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Odf4Q8VI88 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Odf4Q8VI88 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Odf4Q8VI88 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Odf4Q8VI88 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Odf4Q8VI88 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Odf4Q8VI88 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Odf4Q8VI88 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Odf4Q8VI88 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC13.08□□□□□ -0.31
Odf4Q8VI88 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC13.08□□□□□ -0.31
Odf4Q8VI88 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC13.08□□□□□ -0.31
Odf4Q8VI88 Gm43364-201ENSMUST00000196046 3274 ntBASIC13.08□□□□□ -0.31
Odf4Q8VI88 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
Odf4Q8VI88 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
Odf4Q8VI88 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Odf4Q8VI88 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Odf4Q8VI88 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Odf4Q8VI88 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Odf4Q8VI88 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Odf4Q8VI88 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Odf4Q8VI88 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Odf4Q8VI88 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Odf4Q8VI88 CT025610.1-201ENSMUST00000224552 1786 ntBASIC13.08□□□□□ -0.32
Odf4Q8VI88 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Odf4Q8VI88 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC13.08□□□□□ -0.32
Odf4Q8VI88 H2af-ps-201ENSMUST00000119066 295 ntBASIC13.08□□□□□ -0.32
Odf4Q8VI88 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC13.08□□□□□ -0.32
Odf4Q8VI88 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC13.08□□□□□ -0.32
Odf4Q8VI88 Gm25911-201ENSMUST00000157621 56 ntBASIC13.08□□□□□ -0.32
Odf4Q8VI88 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC13.08□□□□□ -0.32
Odf4Q8VI88 Gm9682-201ENSMUST00000197505 556 ntBASIC13.08□□□□□ -0.32
Odf4Q8VI88 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Odf4Q8VI88 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC13.08□□□□□ -0.32
Odf4Q8VI88 Gm10175-201ENSMUST00000086013 645 ntBASIC13.08□□□□□ -0.32
Odf4Q8VI88 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Odf4Q8VI88 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Odf4Q8VI88 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Odf4Q8VI88 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC13.08□□□□□ -0.32
Odf4Q8VI88 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Odf4Q8VI88 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Odf4Q8VI88 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Odf4Q8VI88 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Odf4Q8VI88 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Odf4Q8VI88 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Odf4Q8VI88 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC13.08□□□□□ -0.32
Odf4Q8VI88 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Odf4Q8VI88 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Odf4Q8VI88 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Odf4Q8VI88 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Odf4Q8VI88 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Odf4Q8VI88 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Odf4Q8VI88 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC13.08□□□□□ -0.32
Odf4Q8VI88 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Odf4Q8VI88 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Odf4Q8VI88 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Odf4Q8VI88 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Odf4Q8VI88 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Odf4Q8VI88 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Odf4Q8VI88 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC13.07□□□□□ -0.32
Odf4Q8VI88 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Odf4Q8VI88 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Odf4Q8VI88 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Odf4Q8VI88 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Odf4Q8VI88 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC13.07□□□□□ -0.32
Odf4Q8VI88 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC13.07□□□□□ -0.32
Odf4Q8VI88 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC13.07□□□□□ -0.32
Odf4Q8VI88 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Odf4Q8VI88 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Odf4Q8VI88 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC13.07□□□□□ -0.32
Odf4Q8VI88 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Odf4Q8VI88 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Odf4Q8VI88 AC151286.1-201ENSMUST00000198489 145 ntBASIC13.07□□□□□ -0.32
Odf4Q8VI88 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Odf4Q8VI88 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Odf4Q8VI88 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Odf4Q8VI88 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Odf4Q8VI88 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Odf4Q8VI88 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Odf4Q8VI88 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Odf4Q8VI88 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Odf4Q8VI88 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC13.07□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms