Protein–RNA interactions for Protein: Q8VHS2

Crb1, Protein crumbs homolog 1, mousemouse

Predictions only

Length 1,405 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crb1Q8VHS2 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Crb1Q8VHS2 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Crb1Q8VHS2 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC18.04■□□□□ 0.48
Crb1Q8VHS2 Gm9954-202ENSMUST00000198686 4725 ntBASIC18.04■□□□□ 0.48
Crb1Q8VHS2 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Crb1Q8VHS2 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Crb1Q8VHS2 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Crb1Q8VHS2 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Crb1Q8VHS2 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Crb1Q8VHS2 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Crb1Q8VHS2 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Crb1Q8VHS2 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Crb1Q8VHS2 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Crb1Q8VHS2 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Crb1Q8VHS2 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Crb1Q8VHS2 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Crb1Q8VHS2 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Crb1Q8VHS2 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Crb1Q8VHS2 Gm18027-201ENSMUST00000218947 619 ntBASIC18.03■□□□□ 0.48
Crb1Q8VHS2 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC18.03■□□□□ 0.48
Crb1Q8VHS2 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Crb1Q8VHS2 Gm8775-201ENSMUST00000170943 1327 ntBASIC18.03■□□□□ 0.48
Crb1Q8VHS2 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Crb1Q8VHS2 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Crb1Q8VHS2 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Crb1Q8VHS2 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Crb1Q8VHS2 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Crb1Q8VHS2 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Crb1Q8VHS2 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Crb1Q8VHS2 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Crb1Q8VHS2 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Crb1Q8VHS2 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Crb1Q8VHS2 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Crb1Q8VHS2 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Crb1Q8VHS2 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC18.02■□□□□ 0.48
Crb1Q8VHS2 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Crb1Q8VHS2 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC18.02■□□□□ 0.48
Crb1Q8VHS2 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Crb1Q8VHS2 AL645783.1-201ENSMUST00000221416 1832 ntBASIC18.02■□□□□ 0.48
Crb1Q8VHS2 Gm9816-201ENSMUST00000122292 1414 ntBASIC18.02■□□□□ 0.48
Crb1Q8VHS2 Gm12742-201ENSMUST00000117326 410 ntBASIC18.02■□□□□ 0.48
Crb1Q8VHS2 Mup-ps23-201ENSMUST00000118063 630 ntBASIC18.02■□□□□ 0.48
Crb1Q8VHS2 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC18.02■□□□□ 0.48
Crb1Q8VHS2 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC18.02■□□□□ 0.48
Crb1Q8VHS2 Gm26464-201ENSMUST00000157094 305 ntBASIC18.02■□□□□ 0.48
Crb1Q8VHS2 Snora78-201ENSMUST00000158630 128 ntBASIC18.02■□□□□ 0.48
Crb1Q8VHS2 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Crb1Q8VHS2 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Crb1Q8VHS2 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Crb1Q8VHS2 Gm45331-201ENSMUST00000209868 554 ntBASIC18.02■□□□□ 0.48
Crb1Q8VHS2 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC18.02■□□□□ 0.48
Crb1Q8VHS2 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Crb1Q8VHS2 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC18.02■□□□□ 0.48
Crb1Q8VHS2 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Crb1Q8VHS2 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Crb1Q8VHS2 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
Crb1Q8VHS2 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Crb1Q8VHS2 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
Crb1Q8VHS2 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Crb1Q8VHS2 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC18.01■□□□□ 0.47
Crb1Q8VHS2 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Crb1Q8VHS2 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Crb1Q8VHS2 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Crb1Q8VHS2 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Crb1Q8VHS2 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC18.01■□□□□ 0.47
Crb1Q8VHS2 Gm13392-201ENSMUST00000117708 150 ntBASIC18.01■□□□□ 0.47
Crb1Q8VHS2 Gm15429-201ENSMUST00000151268 798 ntBASIC18.01■□□□□ 0.47
Crb1Q8VHS2 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Crb1Q8VHS2 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC18.01■□□□□ 0.47
Crb1Q8VHS2 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Crb1Q8VHS2 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC18.01■□□□□ 0.47
Crb1Q8VHS2 AC139350.3-201ENSMUST00000226151 420 ntBASIC18.01■□□□□ 0.47
Crb1Q8VHS2 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Crb1Q8VHS2 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Crb1Q8VHS2 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Crb1Q8VHS2 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Crb1Q8VHS2 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Crb1Q8VHS2 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Crb1Q8VHS2 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Crb1Q8VHS2 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC18.01■□□□□ 0.47
Crb1Q8VHS2 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Crb1Q8VHS2 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Crb1Q8VHS2 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Crb1Q8VHS2 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Crb1Q8VHS2 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Crb1Q8VHS2 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC18■□□□□ 0.47
Crb1Q8VHS2 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC18■□□□□ 0.47
Crb1Q8VHS2 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC18■□□□□ 0.47
Crb1Q8VHS2 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Crb1Q8VHS2 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC18■□□□□ 0.47
Crb1Q8VHS2 Gm43094-201ENSMUST00000196549 921 ntBASIC18■□□□□ 0.47
Crb1Q8VHS2 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC18■□□□□ 0.47
Crb1Q8VHS2 Gm7287-201ENSMUST00000205267 602 ntBASIC18■□□□□ 0.47
Crb1Q8VHS2 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Crb1Q8VHS2 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Crb1Q8VHS2 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Crb1Q8VHS2 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Crb1Q8VHS2 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Crb1Q8VHS2 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC18■□□□□ 0.47
Crb1Q8VHS2 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 127.1 ms