Protein–RNA interactions for Protein: Q8VHR0

Pcdh18, Protocadherin 18, mousemouse

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh18Q8VHR0 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdh18Q8VHR0 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Pcdh18Q8VHR0 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdh18Q8VHR0 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdh18Q8VHR0 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Pcdh18Q8VHR0 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdh18Q8VHR0 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Pcdh18Q8VHR0 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdh18Q8VHR0 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdh18Q8VHR0 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdh18Q8VHR0 Gm5049-201ENSMUST00000195878 1590 ntBASIC14.09□□□□□ -0.15
Pcdh18Q8VHR0 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdh18Q8VHR0 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdh18Q8VHR0 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdh18Q8VHR0 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdh18Q8VHR0 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdh18Q8VHR0 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdh18Q8VHR0 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdh18Q8VHR0 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdh18Q8VHR0 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC14.09□□□□□ -0.15
Pcdh18Q8VHR0 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Pcdh18Q8VHR0 Gm15358-201ENSMUST00000119249 520 ntBASIC14.09□□□□□ -0.15
Pcdh18Q8VHR0 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC14.09□□□□□ -0.15
Pcdh18Q8VHR0 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC14.09□□□□□ -0.15
Pcdh18Q8VHR0 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC14.09□□□□□ -0.15
Pcdh18Q8VHR0 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC14.09□□□□□ -0.15
Pcdh18Q8VHR0 Ank2-226ENSMUST00000189368 339 ntBASIC14.09□□□□□ -0.15
Pcdh18Q8VHR0 Gm7556-201ENSMUST00000201178 1084 ntBASIC14.09□□□□□ -0.15
Pcdh18Q8VHR0 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC14.09□□□□□ -0.15
Pcdh18Q8VHR0 AC160338.1-201ENSMUST00000214232 705 ntBASIC14.09□□□□□ -0.15
Pcdh18Q8VHR0 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdh18Q8VHR0 Gm37105-201ENSMUST00000192251 2085 ntBASIC14.09□□□□□ -0.15
Pcdh18Q8VHR0 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdh18Q8VHR0 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdh18Q8VHR0 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC14.09□□□□□ -0.15
Pcdh18Q8VHR0 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdh18Q8VHR0 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdh18Q8VHR0 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdh18Q8VHR0 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdh18Q8VHR0 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdh18Q8VHR0 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.15
Pcdh18Q8VHR0 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC14.08□□□□□ -0.15
Pcdh18Q8VHR0 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Pcdh18Q8VHR0 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdh18Q8VHR0 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdh18Q8VHR0 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdh18Q8VHR0 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdh18Q8VHR0 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdh18Q8VHR0 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdh18Q8VHR0 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC14.08□□□□□ -0.16
Pcdh18Q8VHR0 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Pcdh18Q8VHR0 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdh18Q8VHR0 AC093926.2-201ENSMUST00000214468 1228 ntBASIC14.08□□□□□ -0.16
Pcdh18Q8VHR0 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdh18Q8VHR0 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdh18Q8VHR0 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdh18Q8VHR0 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdh18Q8VHR0 Gm5422-201ENSMUST00000050717 2721 ntBASIC14.08□□□□□ -0.16
Pcdh18Q8VHR0 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Pcdh18Q8VHR0 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdh18Q8VHR0 AC117194.1-201ENSMUST00000224847 3002 ntBASIC14.08□□□□□ -0.16
Pcdh18Q8VHR0 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdh18Q8VHR0 Gm11405-201ENSMUST00000118689 1556 ntBASIC14.08□□□□□ -0.16
Pcdh18Q8VHR0 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdh18Q8VHR0 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdh18Q8VHR0 Gm42928-201ENSMUST00000197338 3339 ntBASIC14.08□□□□□ -0.16
Pcdh18Q8VHR0 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdh18Q8VHR0 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdh18Q8VHR0 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdh18Q8VHR0 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC14.08□□□□□ -0.16
Pcdh18Q8VHR0 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdh18Q8VHR0 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdh18Q8VHR0 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Pcdh18Q8VHR0 Gm44645-201ENSMUST00000205492 1653 ntBASIC14.07□□□□□ -0.16
Pcdh18Q8VHR0 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdh18Q8VHR0 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdh18Q8VHR0 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdh18Q8VHR0 Gm43061-201ENSMUST00000198850 2241 ntBASIC14.07□□□□□ -0.16
Pcdh18Q8VHR0 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC14.07□□□□□ -0.16
Pcdh18Q8VHR0 Gm37644-201ENSMUST00000192190 2270 ntBASIC14.07□□□□□ -0.16
Pcdh18Q8VHR0 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Pcdh18Q8VHR0 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdh18Q8VHR0 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdh18Q8VHR0 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdh18Q8VHR0 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC14.07□□□□□ -0.16
Pcdh18Q8VHR0 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC14.07□□□□□ -0.16
Pcdh18Q8VHR0 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdh18Q8VHR0 Gm13830-205ENSMUST00000201195 1155 ntBASIC14.07□□□□□ -0.16
Pcdh18Q8VHR0 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC14.07□□□□□ -0.16
Pcdh18Q8VHR0 AC122024.2-201ENSMUST00000220086 871 ntBASIC14.07□□□□□ -0.16
Pcdh18Q8VHR0 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdh18Q8VHR0 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC14.07□□□□□ -0.16
Pcdh18Q8VHR0 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Pcdh18Q8VHR0 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdh18Q8VHR0 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdh18Q8VHR0 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdh18Q8VHR0 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdh18Q8VHR0 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdh18Q8VHR0 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdh18Q8VHR0 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC14.07□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms