Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Vps39Q8R5L3 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Vps39Q8R5L3 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Vps39Q8R5L3 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC14.61□□□□□ -0.07
Vps39Q8R5L3 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC14.61□□□□□ -0.07
Vps39Q8R5L3 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC14.61□□□□□ -0.07
Vps39Q8R5L3 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC14.61□□□□□ -0.07
Vps39Q8R5L3 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC14.61□□□□□ -0.07
Vps39Q8R5L3 AC138767.1-201ENSMUST00000222661 415 ntBASIC14.61□□□□□ -0.07
Vps39Q8R5L3 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Vps39Q8R5L3 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Vps39Q8R5L3 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Vps39Q8R5L3 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC14.61□□□□□ -0.07
Vps39Q8R5L3 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Vps39Q8R5L3 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Vps39Q8R5L3 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Vps39Q8R5L3 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Vps39Q8R5L3 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Vps39Q8R5L3 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Vps39Q8R5L3 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Vps39Q8R5L3 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Vps39Q8R5L3 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Vps39Q8R5L3 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC14.61□□□□□ -0.07
Vps39Q8R5L3 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Vps39Q8R5L3 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Vps39Q8R5L3 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Vps39Q8R5L3 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Vps39Q8R5L3 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Vps39Q8R5L3 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC14.6□□□□□ -0.07
Vps39Q8R5L3 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Vps39Q8R5L3 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Vps39Q8R5L3 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Vps39Q8R5L3 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Vps39Q8R5L3 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Vps39Q8R5L3 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC14.6□□□□□ -0.07
Vps39Q8R5L3 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Vps39Q8R5L3 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Vps39Q8R5L3 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Vps39Q8R5L3 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC14.6□□□□□ -0.07
Vps39Q8R5L3 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC14.6□□□□□ -0.07
Vps39Q8R5L3 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Vps39Q8R5L3 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Vps39Q8R5L3 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Vps39Q8R5L3 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Vps39Q8R5L3 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC14.6□□□□□ -0.07
Vps39Q8R5L3 Gm8597-201ENSMUST00000191525 1109 ntBASIC14.6□□□□□ -0.07
Vps39Q8R5L3 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC14.6□□□□□ -0.07
Vps39Q8R5L3 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC14.6□□□□□ -0.07
Vps39Q8R5L3 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC14.6□□□□□ -0.07
Vps39Q8R5L3 Gm10154-201ENSMUST00000084445 354 ntBASIC14.6□□□□□ -0.07
Vps39Q8R5L3 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC14.6□□□□□ -0.07
Vps39Q8R5L3 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Vps39Q8R5L3 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Vps39Q8R5L3 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Vps39Q8R5L3 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Vps39Q8R5L3 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Vps39Q8R5L3 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC14.6□□□□□ -0.07
Vps39Q8R5L3 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Vps39Q8R5L3 Gm43205-201ENSMUST00000198622 1968 ntBASIC14.6□□□□□ -0.07
Vps39Q8R5L3 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Vps39Q8R5L3 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC14.6□□□□□ -0.07
Vps39Q8R5L3 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Vps39Q8R5L3 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Vps39Q8R5L3 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Vps39Q8R5L3 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Vps39Q8R5L3 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Vps39Q8R5L3 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Vps39Q8R5L3 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Vps39Q8R5L3 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Vps39Q8R5L3 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Vps39Q8R5L3 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Vps39Q8R5L3 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC14.59□□□□□ -0.07
Vps39Q8R5L3 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Vps39Q8R5L3 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Vps39Q8R5L3 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Vps39Q8R5L3 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Vps39Q8R5L3 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
Vps39Q8R5L3 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC14.59□□□□□ -0.07
Vps39Q8R5L3 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC14.59□□□□□ -0.07
Vps39Q8R5L3 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC14.59□□□□□ -0.07
Vps39Q8R5L3 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Vps39Q8R5L3 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Vps39Q8R5L3 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Vps39Q8R5L3 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Vps39Q8R5L3 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Vps39Q8R5L3 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Vps39Q8R5L3 Sorbs3-204ENSMUST00000227929 2460 ntBASIC14.59□□□□□ -0.07
Vps39Q8R5L3 AC126250.1-201ENSMUST00000228343 1768 ntBASIC14.59□□□□□ -0.07
Vps39Q8R5L3 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Vps39Q8R5L3 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Vps39Q8R5L3 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC14.59□□□□□ -0.07
Vps39Q8R5L3 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Vps39Q8R5L3 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC14.59□□□□□ -0.07
Vps39Q8R5L3 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Vps39Q8R5L3 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Vps39Q8R5L3 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Vps39Q8R5L3 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Vps39Q8R5L3 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC14.59□□□□□ -0.07
Vps39Q8R5L3 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Vps39Q8R5L3 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms