Protein–RNA interactions for Protein: Q8R429

Atp2a1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp2a1Q8R429 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Atp2a1Q8R429 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Atp2a1Q8R429 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC16.27■□□□□ 0.2
Atp2a1Q8R429 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Atp2a1Q8R429 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Atp2a1Q8R429 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Atp2a1Q8R429 Gm24543-201ENSMUST00000103867 82 ntBASIC16.27■□□□□ 0.2
Atp2a1Q8R429 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC16.27■□□□□ 0.2
Atp2a1Q8R429 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Atp2a1Q8R429 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC16.27■□□□□ 0.2
Atp2a1Q8R429 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
Atp2a1Q8R429 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Atp2a1Q8R429 Gm44344-201ENSMUST00000200287 129 ntBASIC16.27■□□□□ 0.2
Atp2a1Q8R429 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Atp2a1Q8R429 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Atp2a1Q8R429 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
Atp2a1Q8R429 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Atp2a1Q8R429 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
Atp2a1Q8R429 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Atp2a1Q8R429 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
Atp2a1Q8R429 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Atp2a1Q8R429 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Atp2a1Q8R429 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Atp2a1Q8R429 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.19
Atp2a1Q8R429 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Atp2a1Q8R429 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Atp2a1Q8R429 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
Atp2a1Q8R429 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Atp2a1Q8R429 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Atp2a1Q8R429 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Atp2a1Q8R429 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Atp2a1Q8R429 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Atp2a1Q8R429 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Atp2a1Q8R429 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Atp2a1Q8R429 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Atp2a1Q8R429 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Atp2a1Q8R429 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Atp2a1Q8R429 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Atp2a1Q8R429 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC16.26■□□□□ 0.19
Atp2a1Q8R429 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC16.26■□□□□ 0.19
Atp2a1Q8R429 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Atp2a1Q8R429 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Atp2a1Q8R429 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC16.26■□□□□ 0.19
Atp2a1Q8R429 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Atp2a1Q8R429 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Atp2a1Q8R429 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Atp2a1Q8R429 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC16.26■□□□□ 0.19
Atp2a1Q8R429 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Atp2a1Q8R429 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Atp2a1Q8R429 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Atp2a1Q8R429 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Atp2a1Q8R429 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Atp2a1Q8R429 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Atp2a1Q8R429 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Atp2a1Q8R429 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Atp2a1Q8R429 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Atp2a1Q8R429 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Atp2a1Q8R429 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Atp2a1Q8R429 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC16.25■□□□□ 0.19
Atp2a1Q8R429 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Atp2a1Q8R429 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Atp2a1Q8R429 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Atp2a1Q8R429 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Atp2a1Q8R429 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC16.25■□□□□ 0.19
Atp2a1Q8R429 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC16.25■□□□□ 0.19
Atp2a1Q8R429 Gm5866-201ENSMUST00000177881 973 ntBASIC16.25■□□□□ 0.19
Atp2a1Q8R429 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Atp2a1Q8R429 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Atp2a1Q8R429 Gm29310-201ENSMUST00000185468 696 ntBASIC16.25■□□□□ 0.19
Atp2a1Q8R429 Gm21825-201ENSMUST00000185728 696 ntBASIC16.25■□□□□ 0.19
Atp2a1Q8R429 Gm29109-201ENSMUST00000185895 696 ntBASIC16.25■□□□□ 0.19
Atp2a1Q8R429 Gm21896-201ENSMUST00000186520 696 ntBASIC16.25■□□□□ 0.19
Atp2a1Q8R429 Gm21873-201ENSMUST00000186728 696 ntBASIC16.25■□□□□ 0.19
Atp2a1Q8R429 Gm21794-201ENSMUST00000187056 696 ntBASIC16.25■□□□□ 0.19
Atp2a1Q8R429 Gm21880-201ENSMUST00000187275 696 ntBASIC16.25■□□□□ 0.19
Atp2a1Q8R429 Gm21826-201ENSMUST00000187451 696 ntBASIC16.25■□□□□ 0.19
Atp2a1Q8R429 Gm21198-201ENSMUST00000188393 696 ntBASIC16.25■□□□□ 0.19
Atp2a1Q8R429 Gm21749-201ENSMUST00000189343 696 ntBASIC16.25■□□□□ 0.19
Atp2a1Q8R429 Gm21901-201ENSMUST00000189568 696 ntBASIC16.25■□□□□ 0.19
Atp2a1Q8R429 Gm29424-201ENSMUST00000189716 696 ntBASIC16.25■□□□□ 0.19
Atp2a1Q8R429 Gm28599-201ENSMUST00000189838 694 ntBASIC16.25■□□□□ 0.19
Atp2a1Q8R429 Gm21867-201ENSMUST00000189917 696 ntBASIC16.25■□□□□ 0.19
Atp2a1Q8R429 Gm29269-201ENSMUST00000190087 696 ntBASIC16.25■□□□□ 0.19
Atp2a1Q8R429 Gm21722-201ENSMUST00000190153 696 ntBASIC16.25■□□□□ 0.19
Atp2a1Q8R429 Gm28423-201ENSMUST00000190701 696 ntBASIC16.25■□□□□ 0.19
Atp2a1Q8R429 Gm21899-201ENSMUST00000190745 696 ntBASIC16.25■□□□□ 0.19
Atp2a1Q8R429 Gm21910-201ENSMUST00000191163 696 ntBASIC16.25■□□□□ 0.19
Atp2a1Q8R429 Gm21849-201ENSMUST00000191571 696 ntBASIC16.25■□□□□ 0.19
Atp2a1Q8R429 Gm28678-201ENSMUST00000191593 696 ntBASIC16.25■□□□□ 0.19
Atp2a1Q8R429 Gm20910-201ENSMUST00000193268 696 ntBASIC16.25■□□□□ 0.19
Atp2a1Q8R429 Gm21871-201ENSMUST00000194621 696 ntBASIC16.25■□□□□ 0.19
Atp2a1Q8R429 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC16.25■□□□□ 0.19
Atp2a1Q8R429 AC090659.2-201ENSMUST00000225378 1186 ntBASIC16.25■□□□□ 0.19
Atp2a1Q8R429 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Atp2a1Q8R429 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Atp2a1Q8R429 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Atp2a1Q8R429 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Atp2a1Q8R429 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Atp2a1Q8R429 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC16.25■□□□□ 0.19
Atp2a1Q8R429 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 49.2 ms