Protein–RNA interactions for Protein: Q8R1C3

Vopp1, Vesicular, overexpressed in cancer, prosurvival protein 1, mousemouse

Predictions only

Length 172 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vopp1Q8R1C3 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Vopp1Q8R1C3 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vopp1Q8R1C3 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Vopp1Q8R1C3 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Vopp1Q8R1C3 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Vopp1Q8R1C3 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Vopp1Q8R1C3 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Vopp1Q8R1C3 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Vopp1Q8R1C3 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC15.27■□□□□ 0.04
Vopp1Q8R1C3 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC15.27■□□□□ 0.04
Vopp1Q8R1C3 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
Vopp1Q8R1C3 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
Vopp1Q8R1C3 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Vopp1Q8R1C3 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Vopp1Q8R1C3 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Vopp1Q8R1C3 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC15.27■□□□□ 0.04
Vopp1Q8R1C3 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Vopp1Q8R1C3 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Vopp1Q8R1C3 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Vopp1Q8R1C3 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC15.27■□□□□ 0.04
Vopp1Q8R1C3 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Vopp1Q8R1C3 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Vopp1Q8R1C3 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Vopp1Q8R1C3 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Vopp1Q8R1C3 AC159196.2-201ENSMUST00000224082 1622 ntBASIC15.27■□□□□ 0.03
Vopp1Q8R1C3 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC15.27■□□□□ 0.03
Vopp1Q8R1C3 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Vopp1Q8R1C3 Gm42471-201ENSMUST00000201457 1865 ntBASIC15.27■□□□□ 0.03
Vopp1Q8R1C3 Gm9856-201ENSMUST00000217077 2578 ntBASIC15.27■□□□□ 0.03
Vopp1Q8R1C3 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Vopp1Q8R1C3 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Vopp1Q8R1C3 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
Vopp1Q8R1C3 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC15.26■□□□□ 0.03
Vopp1Q8R1C3 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Vopp1Q8R1C3 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Vopp1Q8R1C3 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Vopp1Q8R1C3 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Vopp1Q8R1C3 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC15.26■□□□□ 0.03
Vopp1Q8R1C3 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Vopp1Q8R1C3 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Vopp1Q8R1C3 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Vopp1Q8R1C3 Gm4804-201ENSMUST00000182234 999 ntBASIC15.26■□□□□ 0.03
Vopp1Q8R1C3 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Vopp1Q8R1C3 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC15.26■□□□□ 0.03
Vopp1Q8R1C3 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC15.26■□□□□ 0.03
Vopp1Q8R1C3 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
Vopp1Q8R1C3 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Vopp1Q8R1C3 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Vopp1Q8R1C3 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Vopp1Q8R1C3 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC15.26■□□□□ 0.03
Vopp1Q8R1C3 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Vopp1Q8R1C3 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Vopp1Q8R1C3 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
Vopp1Q8R1C3 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Vopp1Q8R1C3 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Vopp1Q8R1C3 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Vopp1Q8R1C3 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Vopp1Q8R1C3 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Vopp1Q8R1C3 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Vopp1Q8R1C3 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
Vopp1Q8R1C3 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Vopp1Q8R1C3 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Vopp1Q8R1C3 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
Vopp1Q8R1C3 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC15.25■□□□□ 0.03
Vopp1Q8R1C3 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC15.25■□□□□ 0.03
Vopp1Q8R1C3 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC15.25■□□□□ 0.03
Vopp1Q8R1C3 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC15.25■□□□□ 0.03
Vopp1Q8R1C3 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC15.25■□□□□ 0.03
Vopp1Q8R1C3 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC15.25■□□□□ 0.03
Vopp1Q8R1C3 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC15.25■□□□□ 0.03
Vopp1Q8R1C3 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Vopp1Q8R1C3 AC154687.2-201ENSMUST00000223853 640 ntBASIC15.25■□□□□ 0.03
Vopp1Q8R1C3 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Vopp1Q8R1C3 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Vopp1Q8R1C3 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Vopp1Q8R1C3 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Vopp1Q8R1C3 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC15.25■□□□□ 0.03
Vopp1Q8R1C3 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Vopp1Q8R1C3 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Vopp1Q8R1C3 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Vopp1Q8R1C3 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Vopp1Q8R1C3 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Vopp1Q8R1C3 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC15.25■□□□□ 0.03
Vopp1Q8R1C3 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Vopp1Q8R1C3 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Vopp1Q8R1C3 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Vopp1Q8R1C3 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Vopp1Q8R1C3 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Vopp1Q8R1C3 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC15.24■□□□□ 0.03
Vopp1Q8R1C3 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Vopp1Q8R1C3 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC15.24■□□□□ 0.03
Vopp1Q8R1C3 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC15.24■□□□□ 0.03
Vopp1Q8R1C3 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC15.24■□□□□ 0.03
Vopp1Q8R1C3 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Vopp1Q8R1C3 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Vopp1Q8R1C3 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Vopp1Q8R1C3 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC15.24■□□□□ 0.03
Vopp1Q8R1C3 Gm17795-201ENSMUST00000214505 757 ntBASIC15.24■□□□□ 0.03
Vopp1Q8R1C3 AC155286.1-201ENSMUST00000218632 448 ntBASIC15.24■□□□□ 0.03
Vopp1Q8R1C3 Gm19220-201ENSMUST00000222682 803 ntBASIC15.24■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms