Protein–RNA interactions for Protein: Q8CHD8

Rab11fip3, Rab11 family-interacting protein 3, mousemouse

Predictions only

Length 1,047 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab11fip3Q8CHD8 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Rab11fip3Q8CHD8 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Rab11fip3Q8CHD8 Cd63-ps-201ENSMUST00000145417 875 ntBASIC18.82■□□□□ 0.6
Rab11fip3Q8CHD8 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rab11fip3Q8CHD8 Gm24694-201ENSMUST00000180054 110 ntBASIC18.82■□□□□ 0.6
Rab11fip3Q8CHD8 Gm27663-201ENSMUST00000184839 110 ntBASIC18.82■□□□□ 0.6
Rab11fip3Q8CHD8 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Rab11fip3Q8CHD8 Arhgef33-209ENSMUST00000225223 714 ntBASIC18.82■□□□□ 0.6
Rab11fip3Q8CHD8 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Rab11fip3Q8CHD8 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Rab11fip3Q8CHD8 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Rab11fip3Q8CHD8 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC18.82■□□□□ 0.6
Rab11fip3Q8CHD8 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rab11fip3Q8CHD8 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rab11fip3Q8CHD8 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Rab11fip3Q8CHD8 Gm5763-201ENSMUST00000155951 1530 ntBASIC18.81■□□□□ 0.6
Rab11fip3Q8CHD8 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rab11fip3Q8CHD8 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Rab11fip3Q8CHD8 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Rab11fip3Q8CHD8 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC18.81■□□□□ 0.6
Rab11fip3Q8CHD8 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Rab11fip3Q8CHD8 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC18.81■□□□□ 0.6
Rab11fip3Q8CHD8 Gm43703-201ENSMUST00000200523 763 ntBASIC18.81■□□□□ 0.6
Rab11fip3Q8CHD8 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Rab11fip3Q8CHD8 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Rab11fip3Q8CHD8 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rab11fip3Q8CHD8 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Rab11fip3Q8CHD8 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Rab11fip3Q8CHD8 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rab11fip3Q8CHD8 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rab11fip3Q8CHD8 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rab11fip3Q8CHD8 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rab11fip3Q8CHD8 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Rab11fip3Q8CHD8 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rab11fip3Q8CHD8 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rab11fip3Q8CHD8 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rab11fip3Q8CHD8 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rab11fip3Q8CHD8 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Rab11fip3Q8CHD8 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rab11fip3Q8CHD8 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rab11fip3Q8CHD8 Gm7820-201ENSMUST00000121012 1052 ntBASIC18.8■□□□□ 0.6
Rab11fip3Q8CHD8 Gm12882-201ENSMUST00000121696 517 ntBASIC18.8■□□□□ 0.6
Rab11fip3Q8CHD8 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Rab11fip3Q8CHD8 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC18.8■□□□□ 0.6
Rab11fip3Q8CHD8 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC18.8■□□□□ 0.6
Rab11fip3Q8CHD8 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rab11fip3Q8CHD8 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rab11fip3Q8CHD8 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC18.8■□□□□ 0.6
Rab11fip3Q8CHD8 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rab11fip3Q8CHD8 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rab11fip3Q8CHD8 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rab11fip3Q8CHD8 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rab11fip3Q8CHD8 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rab11fip3Q8CHD8 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC18.79■□□□□ 0.6
Rab11fip3Q8CHD8 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rab11fip3Q8CHD8 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rab11fip3Q8CHD8 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Rab11fip3Q8CHD8 Gm23547-201ENSMUST00000158210 271 ntBASIC18.79■□□□□ 0.6
Rab11fip3Q8CHD8 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rab11fip3Q8CHD8 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC18.79■□□□□ 0.6
Rab11fip3Q8CHD8 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Rab11fip3Q8CHD8 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rab11fip3Q8CHD8 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rab11fip3Q8CHD8 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rab11fip3Q8CHD8 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rab11fip3Q8CHD8 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rab11fip3Q8CHD8 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Rab11fip3Q8CHD8 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rab11fip3Q8CHD8 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Rab11fip3Q8CHD8 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Rab11fip3Q8CHD8 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rab11fip3Q8CHD8 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rab11fip3Q8CHD8 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rab11fip3Q8CHD8 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rab11fip3Q8CHD8 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Rab11fip3Q8CHD8 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rab11fip3Q8CHD8 Gm3365-201ENSMUST00000216296 1480 ntBASIC18.78■□□□□ 0.6
Rab11fip3Q8CHD8 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rab11fip3Q8CHD8 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rab11fip3Q8CHD8 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rab11fip3Q8CHD8 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Rab11fip3Q8CHD8 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rab11fip3Q8CHD8 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Rab11fip3Q8CHD8 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rab11fip3Q8CHD8 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Rab11fip3Q8CHD8 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Rab11fip3Q8CHD8 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Rab11fip3Q8CHD8 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC18.78■□□□□ 0.6
Rab11fip3Q8CHD8 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Rab11fip3Q8CHD8 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rab11fip3Q8CHD8 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Rab11fip3Q8CHD8 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Rab11fip3Q8CHD8 Gm5357-201ENSMUST00000212720 1924 ntBASIC18.78■□□□□ 0.6
Rab11fip3Q8CHD8 Sybu-209ENSMUST00000228639 4113 ntBASIC18.78■□□□□ 0.6
Rab11fip3Q8CHD8 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Rab11fip3Q8CHD8 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Rab11fip3Q8CHD8 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rab11fip3Q8CHD8 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC18.77■□□□□ 0.6
Rab11fip3Q8CHD8 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC18.77■□□□□ 0.6
Rab11fip3Q8CHD8 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC18.77■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms