Protein–RNA interactions for Protein: Q8CG46

Smc5, Structural maintenance of chromosomes protein 5, mousemouse

Known RBP Predictions only

Length 1,101 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc5Q8CG46 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Smc5Q8CG46 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Smc5Q8CG46 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Smc5Q8CG46 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Smc5Q8CG46 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
Smc5Q8CG46 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Smc5Q8CG46 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Smc5Q8CG46 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Smc5Q8CG46 Gm11873-201ENSMUST00000117877 1304 ntBASIC18.02■□□□□ 0.48
Smc5Q8CG46 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC18.02■□□□□ 0.48
Smc5Q8CG46 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
Smc5Q8CG46 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Smc5Q8CG46 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Smc5Q8CG46 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC18.02■□□□□ 0.48
Smc5Q8CG46 Gm11452-201ENSMUST00000122376 690 ntBASIC18.02■□□□□ 0.48
Smc5Q8CG46 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC18.02■□□□□ 0.48
Smc5Q8CG46 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Smc5Q8CG46 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC18.02■□□□□ 0.48
Smc5Q8CG46 Gm30238-201ENSMUST00000195528 2603 ntBASIC18.02■□□□□ 0.48
Smc5Q8CG46 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC18.02■□□□□ 0.48
Smc5Q8CG46 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Smc5Q8CG46 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Smc5Q8CG46 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Smc5Q8CG46 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
Smc5Q8CG46 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Smc5Q8CG46 Gm42769-201ENSMUST00000198576 1659 ntBASIC18.02■□□□□ 0.47
Smc5Q8CG46 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
Smc5Q8CG46 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Smc5Q8CG46 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Smc5Q8CG46 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Smc5Q8CG46 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Smc5Q8CG46 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Smc5Q8CG46 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Smc5Q8CG46 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Smc5Q8CG46 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Smc5Q8CG46 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Smc5Q8CG46 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Smc5Q8CG46 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Smc5Q8CG46 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Smc5Q8CG46 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC18.01■□□□□ 0.47
Smc5Q8CG46 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC18.01■□□□□ 0.47
Smc5Q8CG46 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Smc5Q8CG46 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Smc5Q8CG46 AC102291.3-201ENSMUST00000226566 405 ntBASIC18.01■□□□□ 0.47
Smc5Q8CG46 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC18.01■□□□□ 0.47
Smc5Q8CG46 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Smc5Q8CG46 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Smc5Q8CG46 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Smc5Q8CG46 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Smc5Q8CG46 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Smc5Q8CG46 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Smc5Q8CG46 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Smc5Q8CG46 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC18■□□□□ 0.47
Smc5Q8CG46 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Smc5Q8CG46 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Smc5Q8CG46 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Smc5Q8CG46 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Smc5Q8CG46 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC18■□□□□ 0.47
Smc5Q8CG46 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC18■□□□□ 0.47
Smc5Q8CG46 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC18■□□□□ 0.47
Smc5Q8CG46 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Smc5Q8CG46 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC18■□□□□ 0.47
Smc5Q8CG46 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC18■□□□□ 0.47
Smc5Q8CG46 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Smc5Q8CG46 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Smc5Q8CG46 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC18■□□□□ 0.47
Smc5Q8CG46 Gm2420-202ENSMUST00000202224 2249 ntBASIC18■□□□□ 0.47
Smc5Q8CG46 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Smc5Q8CG46 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC18■□□□□ 0.47
Smc5Q8CG46 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Smc5Q8CG46 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Smc5Q8CG46 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Smc5Q8CG46 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Smc5Q8CG46 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC18■□□□□ 0.47
Smc5Q8CG46 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Smc5Q8CG46 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Smc5Q8CG46 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Smc5Q8CG46 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Smc5Q8CG46 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Smc5Q8CG46 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Smc5Q8CG46 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC17.99■□□□□ 0.47
Smc5Q8CG46 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Smc5Q8CG46 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC17.99■□□□□ 0.47
Smc5Q8CG46 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC17.99■□□□□ 0.47
Smc5Q8CG46 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC17.99■□□□□ 0.47
Smc5Q8CG46 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC17.99■□□□□ 0.47
Smc5Q8CG46 Gm17971-201ENSMUST00000190239 806 ntBASIC17.99■□□□□ 0.47
Smc5Q8CG46 Gm10459-201ENSMUST00000202708 1155 ntBASIC17.99■□□□□ 0.47
Smc5Q8CG46 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC17.99■□□□□ 0.47
Smc5Q8CG46 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Smc5Q8CG46 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Smc5Q8CG46 Gm15590-201ENSMUST00000078419 552 ntBASIC17.99■□□□□ 0.47
Smc5Q8CG46 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Smc5Q8CG46 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Smc5Q8CG46 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Smc5Q8CG46 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Smc5Q8CG46 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Smc5Q8CG46 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Smc5Q8CG46 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC17.99■□□□□ 0.47
Smc5Q8CG46 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms