Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc28bQ8CEG5 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc28bQ8CEG5 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC14.41□□□□□ -0.1
Ccdc28bQ8CEG5 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc28bQ8CEG5 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc28bQ8CEG5 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC14.41□□□□□ -0.1
Ccdc28bQ8CEG5 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc28bQ8CEG5 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc28bQ8CEG5 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
Ccdc28bQ8CEG5 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Ccdc28bQ8CEG5 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC14.41□□□□□ -0.1
Ccdc28bQ8CEG5 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC14.41□□□□□ -0.1
Ccdc28bQ8CEG5 AC164567.1-201ENSMUST00000219185 960 ntBASIC14.41□□□□□ -0.1
Ccdc28bQ8CEG5 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc28bQ8CEG5 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc28bQ8CEG5 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc28bQ8CEG5 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc28bQ8CEG5 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc28bQ8CEG5 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc28bQ8CEG5 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc28bQ8CEG5 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc28bQ8CEG5 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc28bQ8CEG5 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc28bQ8CEG5 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc28bQ8CEG5 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc28bQ8CEG5 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc28bQ8CEG5 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc28bQ8CEG5 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc28bQ8CEG5 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc28bQ8CEG5 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc28bQ8CEG5 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc28bQ8CEG5 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc28bQ8CEG5 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc28bQ8CEG5 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc28bQ8CEG5 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc28bQ8CEG5 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc28bQ8CEG5 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc28bQ8CEG5 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC14.41□□□□□ -0.1
Ccdc28bQ8CEG5 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc28bQ8CEG5 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc28bQ8CEG5 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc28bQ8CEG5 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc28bQ8CEG5 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc28bQ8CEG5 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc28bQ8CEG5 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc28bQ8CEG5 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC14.4□□□□□ -0.1
Ccdc28bQ8CEG5 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc28bQ8CEG5 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc28bQ8CEG5 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc28bQ8CEG5 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc28bQ8CEG5 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Ccdc28bQ8CEG5 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc28bQ8CEG5 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc28bQ8CEG5 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc28bQ8CEG5 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc28bQ8CEG5 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Ccdc28bQ8CEG5 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc28bQ8CEG5 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Ccdc28bQ8CEG5 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC14.4□□□□□ -0.1
Ccdc28bQ8CEG5 Gm6659-201ENSMUST00000174752 547 ntBASIC14.4□□□□□ -0.1
Ccdc28bQ8CEG5 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc28bQ8CEG5 Gm27646-201ENSMUST00000183989 110 ntBASIC14.4□□□□□ -0.1
Ccdc28bQ8CEG5 Otx2os1-206ENSMUST00000228153 787 ntBASIC14.4□□□□□ -0.1
Ccdc28bQ8CEG5 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
Ccdc28bQ8CEG5 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Ccdc28bQ8CEG5 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Ccdc28bQ8CEG5 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc28bQ8CEG5 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc28bQ8CEG5 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Ccdc28bQ8CEG5 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Ccdc28bQ8CEG5 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc28bQ8CEG5 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc28bQ8CEG5 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc28bQ8CEG5 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC14.4□□□□□ -0.1
Ccdc28bQ8CEG5 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc28bQ8CEG5 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc28bQ8CEG5 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc28bQ8CEG5 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc28bQ8CEG5 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc28bQ8CEG5 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC14.39□□□□□ -0.11
Ccdc28bQ8CEG5 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC14.39□□□□□ -0.11
Ccdc28bQ8CEG5 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc28bQ8CEG5 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc28bQ8CEG5 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc28bQ8CEG5 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Ccdc28bQ8CEG5 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc28bQ8CEG5 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc28bQ8CEG5 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc28bQ8CEG5 Gm6296-201ENSMUST00000222599 943 ntBASIC14.39□□□□□ -0.11
Ccdc28bQ8CEG5 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC14.39□□□□□ -0.11
Ccdc28bQ8CEG5 AC124569.2-201ENSMUST00000225998 818 ntBASIC14.39□□□□□ -0.11
Ccdc28bQ8CEG5 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc28bQ8CEG5 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc28bQ8CEG5 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
Ccdc28bQ8CEG5 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc28bQ8CEG5 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC14.39□□□□□ -0.11
Ccdc28bQ8CEG5 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc28bQ8CEG5 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC14.39□□□□□ -0.11
Ccdc28bQ8CEG5 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc28bQ8CEG5 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 46.7 ms