Protein–RNA interactions for Protein: Q8CDW1

Fam228a, Protein FAM228A, mousemouse

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam228aQ8CDW1 AC159301.1-201ENSMUST00000225130 1182 ntBASIC15.32■□□□□ 0.04
Fam228aQ8CDW1 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Fam228aQ8CDW1 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Fam228aQ8CDW1 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Fam228aQ8CDW1 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Fam228aQ8CDW1 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Fam228aQ8CDW1 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC15.32■□□□□ 0.04
Fam228aQ8CDW1 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Fam228aQ8CDW1 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Fam228aQ8CDW1 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC15.32■□□□□ 0.04
Fam228aQ8CDW1 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
Fam228aQ8CDW1 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Fam228aQ8CDW1 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Fam228aQ8CDW1 Gm42471-201ENSMUST00000201457 1865 ntBASIC15.31■□□□□ 0.04
Fam228aQ8CDW1 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Fam228aQ8CDW1 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Fam228aQ8CDW1 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Fam228aQ8CDW1 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Fam228aQ8CDW1 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Fam228aQ8CDW1 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Fam228aQ8CDW1 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
Fam228aQ8CDW1 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Fam228aQ8CDW1 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Fam228aQ8CDW1 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC15.31■□□□□ 0.04
Fam228aQ8CDW1 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC15.31■□□□□ 0.04
Fam228aQ8CDW1 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Fam228aQ8CDW1 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Fam228aQ8CDW1 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Fam228aQ8CDW1 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Fam228aQ8CDW1 Gm5682-201ENSMUST00000173402 505 ntBASIC15.31■□□□□ 0.04
Fam228aQ8CDW1 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Fam228aQ8CDW1 Gm17807-201ENSMUST00000186869 298 ntBASIC15.31■□□□□ 0.04
Fam228aQ8CDW1 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC15.31■□□□□ 0.04
Fam228aQ8CDW1 Gm6089-201ENSMUST00000197666 938 ntBASIC15.31■□□□□ 0.04
Fam228aQ8CDW1 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC15.31■□□□□ 0.04
Fam228aQ8CDW1 Gm7787-201ENSMUST00000216858 688 ntBASIC15.31■□□□□ 0.04
Fam228aQ8CDW1 AC155729.1-201ENSMUST00000227758 544 ntBASIC15.31■□□□□ 0.04
Fam228aQ8CDW1 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Fam228aQ8CDW1 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Fam228aQ8CDW1 Gm43056-201ENSMUST00000197865 2791 ntBASIC15.31■□□□□ 0.04
Fam228aQ8CDW1 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Fam228aQ8CDW1 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Fam228aQ8CDW1 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Fam228aQ8CDW1 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Fam228aQ8CDW1 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Fam228aQ8CDW1 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Fam228aQ8CDW1 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Fam228aQ8CDW1 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Fam228aQ8CDW1 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Fam228aQ8CDW1 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Fam228aQ8CDW1 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Fam228aQ8CDW1 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Fam228aQ8CDW1 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Fam228aQ8CDW1 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Fam228aQ8CDW1 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Fam228aQ8CDW1 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC15.3■□□□□ 0.04
Fam228aQ8CDW1 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Fam228aQ8CDW1 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC15.3■□□□□ 0.04
Fam228aQ8CDW1 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC15.3■□□□□ 0.04
Fam228aQ8CDW1 Gm37500-201ENSMUST00000192059 1443 ntBASIC15.3■□□□□ 0.04
Fam228aQ8CDW1 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Fam228aQ8CDW1 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC15.3■□□□□ 0.04
Fam228aQ8CDW1 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Fam228aQ8CDW1 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Fam228aQ8CDW1 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Fam228aQ8CDW1 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Fam228aQ8CDW1 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Fam228aQ8CDW1 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Fam228aQ8CDW1 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC15.3■□□□□ 0.04
Fam228aQ8CDW1 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Fam228aQ8CDW1 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Fam228aQ8CDW1 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC15.3■□□□□ 0.04
Fam228aQ8CDW1 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Fam228aQ8CDW1 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Fam228aQ8CDW1 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Fam228aQ8CDW1 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Fam228aQ8CDW1 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Fam228aQ8CDW1 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Fam228aQ8CDW1 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Fam228aQ8CDW1 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
Fam228aQ8CDW1 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Fam228aQ8CDW1 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Fam228aQ8CDW1 AC126250.1-201ENSMUST00000228343 1768 ntBASIC15.29■□□□□ 0.04
Fam228aQ8CDW1 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Fam228aQ8CDW1 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Fam228aQ8CDW1 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC15.29■□□□□ 0.04
Fam228aQ8CDW1 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC15.29■□□□□ 0.04
Fam228aQ8CDW1 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Fam228aQ8CDW1 Gm15593-201ENSMUST00000122085 1008 ntBASIC15.29■□□□□ 0.04
Fam228aQ8CDW1 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Fam228aQ8CDW1 Gm9726-201ENSMUST00000180321 678 ntBASIC15.29■□□□□ 0.04
Fam228aQ8CDW1 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Fam228aQ8CDW1 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Fam228aQ8CDW1 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Fam228aQ8CDW1 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Fam228aQ8CDW1 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Fam228aQ8CDW1 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Fam228aQ8CDW1 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Fam228aQ8CDW1 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Fam228aQ8CDW1 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms