Protein–RNA interactions for Protein: Q8C2E4

Ptcd1, Pentatricopeptide repeat-containing protein 1, mitochondrial, mousemouse

Known RBP Predictions only

Length 695 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptcd1Q8C2E4 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ptcd1Q8C2E4 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ptcd1Q8C2E4 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ptcd1Q8C2E4 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Ptcd1Q8C2E4 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ptcd1Q8C2E4 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ptcd1Q8C2E4 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ptcd1Q8C2E4 Gm13034-201ENSMUST00000121342 3177 ntBASIC17.91■□□□□ 0.46
Ptcd1Q8C2E4 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Ptcd1Q8C2E4 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Ptcd1Q8C2E4 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ptcd1Q8C2E4 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ptcd1Q8C2E4 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ptcd1Q8C2E4 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ptcd1Q8C2E4 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Ptcd1Q8C2E4 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Ptcd1Q8C2E4 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ptcd1Q8C2E4 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Ptcd1Q8C2E4 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Ptcd1Q8C2E4 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ptcd1Q8C2E4 Gm10584-201ENSMUST00000207036 2628 ntBASIC17.9■□□□□ 0.46
Ptcd1Q8C2E4 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ptcd1Q8C2E4 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Ptcd1Q8C2E4 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ptcd1Q8C2E4 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Ptcd1Q8C2E4 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ptcd1Q8C2E4 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ptcd1Q8C2E4 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ptcd1Q8C2E4 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ptcd1Q8C2E4 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC17.9■□□□□ 0.46
Ptcd1Q8C2E4 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Ptcd1Q8C2E4 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ptcd1Q8C2E4 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC17.9■□□□□ 0.46
Ptcd1Q8C2E4 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Ptcd1Q8C2E4 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC17.9■□□□□ 0.46
Ptcd1Q8C2E4 Gm17150-201ENSMUST00000165577 381 ntBASIC17.9■□□□□ 0.46
Ptcd1Q8C2E4 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Ptcd1Q8C2E4 Gm7390-201ENSMUST00000212452 1216 ntBASIC17.9■□□□□ 0.46
Ptcd1Q8C2E4 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ptcd1Q8C2E4 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ptcd1Q8C2E4 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ptcd1Q8C2E4 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Ptcd1Q8C2E4 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ptcd1Q8C2E4 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Ptcd1Q8C2E4 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ptcd1Q8C2E4 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ptcd1Q8C2E4 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Ptcd1Q8C2E4 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC17.9■□□□□ 0.46
Ptcd1Q8C2E4 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ptcd1Q8C2E4 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ptcd1Q8C2E4 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ptcd1Q8C2E4 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ptcd1Q8C2E4 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Ptcd1Q8C2E4 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC17.89■□□□□ 0.46
Ptcd1Q8C2E4 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC17.89■□□□□ 0.46
Ptcd1Q8C2E4 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ptcd1Q8C2E4 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ptcd1Q8C2E4 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
Ptcd1Q8C2E4 Dupd1-202ENSMUST00000224735 548 ntBASIC17.89■□□□□ 0.45
Ptcd1Q8C2E4 Rassf8-202ENSMUST00000058538 1131 ntBASIC17.89■□□□□ 0.45
Ptcd1Q8C2E4 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ptcd1Q8C2E4 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Ptcd1Q8C2E4 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ptcd1Q8C2E4 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ptcd1Q8C2E4 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ptcd1Q8C2E4 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Ptcd1Q8C2E4 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ptcd1Q8C2E4 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Ptcd1Q8C2E4 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Ptcd1Q8C2E4 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ptcd1Q8C2E4 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Ptcd1Q8C2E4 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ptcd1Q8C2E4 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ptcd1Q8C2E4 Gm9867-201ENSMUST00000192212 2647 ntBASIC17.88■□□□□ 0.45
Ptcd1Q8C2E4 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ptcd1Q8C2E4 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC17.88■□□□□ 0.45
Ptcd1Q8C2E4 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ptcd1Q8C2E4 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ptcd1Q8C2E4 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ptcd1Q8C2E4 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Ptcd1Q8C2E4 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ptcd1Q8C2E4 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ptcd1Q8C2E4 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Ptcd1Q8C2E4 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC17.88■□□□□ 0.45
Ptcd1Q8C2E4 Gm18624-201ENSMUST00000220966 658 ntBASIC17.88■□□□□ 0.45
Ptcd1Q8C2E4 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC17.88■□□□□ 0.45
Ptcd1Q8C2E4 AC154687.2-201ENSMUST00000223853 640 ntBASIC17.88■□□□□ 0.45
Ptcd1Q8C2E4 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ptcd1Q8C2E4 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ptcd1Q8C2E4 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ptcd1Q8C2E4 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ptcd1Q8C2E4 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ptcd1Q8C2E4 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Ptcd1Q8C2E4 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC17.88■□□□□ 0.45
Ptcd1Q8C2E4 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Ptcd1Q8C2E4 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
Ptcd1Q8C2E4 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC17.87■□□□□ 0.45
Ptcd1Q8C2E4 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Ptcd1Q8C2E4 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ptcd1Q8C2E4 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms