Protein–RNA interactions for Protein: Q8C1Q6

Smim4, Small integral membrane protein 4, mousemouse

Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim4Q8C1Q6 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC12.23□□□□□ -0.45
Smim4Q8C1Q6 AC025913.2-201ENSMUST00000220136 1766 ntBASIC12.23□□□□□ -0.45
Smim4Q8C1Q6 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Smim4Q8C1Q6 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Smim4Q8C1Q6 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Smim4Q8C1Q6 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Smim4Q8C1Q6 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC12.22□□□□□ -0.45
Smim4Q8C1Q6 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Smim4Q8C1Q6 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Smim4Q8C1Q6 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Smim4Q8C1Q6 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Smim4Q8C1Q6 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Smim4Q8C1Q6 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Smim4Q8C1Q6 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Smim4Q8C1Q6 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC12.22□□□□□ -0.45
Smim4Q8C1Q6 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC12.22□□□□□ -0.45
Smim4Q8C1Q6 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC12.22□□□□□ -0.45
Smim4Q8C1Q6 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC12.22□□□□□ -0.45
Smim4Q8C1Q6 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC12.22□□□□□ -0.45
Smim4Q8C1Q6 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC12.22□□□□□ -0.45
Smim4Q8C1Q6 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC12.22□□□□□ -0.45
Smim4Q8C1Q6 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Smim4Q8C1Q6 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC12.22□□□□□ -0.45
Smim4Q8C1Q6 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Smim4Q8C1Q6 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Smim4Q8C1Q6 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC12.22□□□□□ -0.45
Smim4Q8C1Q6 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Smim4Q8C1Q6 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Smim4Q8C1Q6 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Smim4Q8C1Q6 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Smim4Q8C1Q6 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Smim4Q8C1Q6 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Smim4Q8C1Q6 Gm8096-201ENSMUST00000209921 1591 ntBASIC12.22□□□□□ -0.45
Smim4Q8C1Q6 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Smim4Q8C1Q6 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Smim4Q8C1Q6 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Smim4Q8C1Q6 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC12.21□□□□□ -0.45
Smim4Q8C1Q6 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Smim4Q8C1Q6 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC12.21□□□□□ -0.45
Smim4Q8C1Q6 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Smim4Q8C1Q6 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Smim4Q8C1Q6 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Smim4Q8C1Q6 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Smim4Q8C1Q6 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC12.21□□□□□ -0.45
Smim4Q8C1Q6 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC12.21□□□□□ -0.45
Smim4Q8C1Q6 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Smim4Q8C1Q6 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Smim4Q8C1Q6 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC12.21□□□□□ -0.45
Smim4Q8C1Q6 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC12.21□□□□□ -0.45
Smim4Q8C1Q6 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Smim4Q8C1Q6 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Smim4Q8C1Q6 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Smim4Q8C1Q6 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Smim4Q8C1Q6 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC12.21□□□□□ -0.45
Smim4Q8C1Q6 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Smim4Q8C1Q6 Gm28659-201ENSMUST00000188013 759 ntBASIC12.21□□□□□ -0.45
Smim4Q8C1Q6 Gm42670-201ENSMUST00000201816 1292 ntBASIC12.21□□□□□ -0.45
Smim4Q8C1Q6 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC12.21□□□□□ -0.45
Smim4Q8C1Q6 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Smim4Q8C1Q6 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Smim4Q8C1Q6 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC12.21□□□□□ -0.45
Smim4Q8C1Q6 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Smim4Q8C1Q6 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Smim4Q8C1Q6 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Smim4Q8C1Q6 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Smim4Q8C1Q6 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Smim4Q8C1Q6 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Smim4Q8C1Q6 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC12.21□□□□□ -0.45
Smim4Q8C1Q6 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Smim4Q8C1Q6 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Smim4Q8C1Q6 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Smim4Q8C1Q6 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Smim4Q8C1Q6 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Smim4Q8C1Q6 Gm45546-201ENSMUST00000211053 2394 ntBASIC12.21□□□□□ -0.46
Smim4Q8C1Q6 Gm43205-201ENSMUST00000198622 1968 ntBASIC12.21□□□□□ -0.46
Smim4Q8C1Q6 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Smim4Q8C1Q6 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
Smim4Q8C1Q6 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Smim4Q8C1Q6 AC167013.2-201ENSMUST00000228520 2684 ntBASIC12.21□□□□□ -0.46
Smim4Q8C1Q6 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Smim4Q8C1Q6 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Smim4Q8C1Q6 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC12.21□□□□□ -0.46
Smim4Q8C1Q6 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC12.21□□□□□ -0.46
Smim4Q8C1Q6 Gm43697-201ENSMUST00000199637 2581 ntBASIC12.21□□□□□ -0.46
Smim4Q8C1Q6 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
Smim4Q8C1Q6 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Smim4Q8C1Q6 Gm10710-201ENSMUST00000047876 3971 ntBASIC12.2□□□□□ -0.46
Smim4Q8C1Q6 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Smim4Q8C1Q6 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Smim4Q8C1Q6 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Smim4Q8C1Q6 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Smim4Q8C1Q6 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Smim4Q8C1Q6 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Smim4Q8C1Q6 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC12.2□□□□□ -0.46
Smim4Q8C1Q6 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Smim4Q8C1Q6 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Smim4Q8C1Q6 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Smim4Q8C1Q6 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Smim4Q8C1Q6 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Smim4Q8C1Q6 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms