Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC14.76□□□□□ -0.05
Sh3rf2Q8BZT2 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Sh3rf2Q8BZT2 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC14.76□□□□□ -0.05
Sh3rf2Q8BZT2 Gm45453-201ENSMUST00000211758 853 ntBASIC14.76□□□□□ -0.05
Sh3rf2Q8BZT2 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Sh3rf2Q8BZT2 AC132863.2-201ENSMUST00000226643 799 ntBASIC14.76□□□□□ -0.05
Sh3rf2Q8BZT2 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Sh3rf2Q8BZT2 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Sh3rf2Q8BZT2 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Sh3rf2Q8BZT2 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Sh3rf2Q8BZT2 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Sh3rf2Q8BZT2 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Sh3rf2Q8BZT2 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Sh3rf2Q8BZT2 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Sh3rf2Q8BZT2 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Sh3rf2Q8BZT2 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Sh3rf2Q8BZT2 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Sh3rf2Q8BZT2 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Sh3rf2Q8BZT2 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
Sh3rf2Q8BZT2 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Sh3rf2Q8BZT2 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Sh3rf2Q8BZT2 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Sh3rf2Q8BZT2 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Sh3rf2Q8BZT2 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Sh3rf2Q8BZT2 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC14.75□□□□□ -0.05
Sh3rf2Q8BZT2 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC14.75□□□□□ -0.05
Sh3rf2Q8BZT2 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Sh3rf2Q8BZT2 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Sh3rf2Q8BZT2 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Sh3rf2Q8BZT2 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC14.75□□□□□ -0.05
Sh3rf2Q8BZT2 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Sh3rf2Q8BZT2 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC14.75□□□□□ -0.05
Sh3rf2Q8BZT2 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Sh3rf2Q8BZT2 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Sh3rf2Q8BZT2 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Sh3rf2Q8BZT2 Gm15653-201ENSMUST00000119247 907 ntBASIC14.75□□□□□ -0.05
Sh3rf2Q8BZT2 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC14.75□□□□□ -0.05
Sh3rf2Q8BZT2 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC14.75□□□□□ -0.05
Sh3rf2Q8BZT2 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC14.75□□□□□ -0.05
Sh3rf2Q8BZT2 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Sh3rf2Q8BZT2 Gm27838-201ENSMUST00000184829 128 ntBASIC14.75□□□□□ -0.05
Sh3rf2Q8BZT2 Gm7730-201ENSMUST00000212486 454 ntBASIC14.75□□□□□ -0.05
Sh3rf2Q8BZT2 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Sh3rf2Q8BZT2 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Sh3rf2Q8BZT2 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Sh3rf2Q8BZT2 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Sh3rf2Q8BZT2 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC14.75□□□□□ -0.05
Sh3rf2Q8BZT2 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Sh3rf2Q8BZT2 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Sh3rf2Q8BZT2 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Sh3rf2Q8BZT2 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Sh3rf2Q8BZT2 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Sh3rf2Q8BZT2 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC14.75□□□□□ -0.05
Sh3rf2Q8BZT2 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Sh3rf2Q8BZT2 Gm44443-201ENSMUST00000204396 5633 ntBASIC14.74□□□□□ -0.05
Sh3rf2Q8BZT2 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC14.74□□□□□ -0.05
Sh3rf2Q8BZT2 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Sh3rf2Q8BZT2 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Sh3rf2Q8BZT2 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Sh3rf2Q8BZT2 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Sh3rf2Q8BZT2 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Sh3rf2Q8BZT2 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Sh3rf2Q8BZT2 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Sh3rf2Q8BZT2 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Sh3rf2Q8BZT2 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Sh3rf2Q8BZT2 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Sh3rf2Q8BZT2 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Sh3rf2Q8BZT2 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC14.74□□□□□ -0.05
Sh3rf2Q8BZT2 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Sh3rf2Q8BZT2 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Sh3rf2Q8BZT2 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Sh3rf2Q8BZT2 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC14.74□□□□□ -0.05
Sh3rf2Q8BZT2 Cd63-ps-201ENSMUST00000145417 875 ntBASIC14.74□□□□□ -0.05
Sh3rf2Q8BZT2 Gm16215-201ENSMUST00000161990 637 ntBASIC14.74□□□□□ -0.05
Sh3rf2Q8BZT2 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Sh3rf2Q8BZT2 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC14.74□□□□□ -0.05
Sh3rf2Q8BZT2 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Sh3rf2Q8BZT2 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Sh3rf2Q8BZT2 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Sh3rf2Q8BZT2 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Sh3rf2Q8BZT2 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Sh3rf2Q8BZT2 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Sh3rf2Q8BZT2 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC14.74□□□□□ -0.05
Sh3rf2Q8BZT2 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Sh3rf2Q8BZT2 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Sh3rf2Q8BZT2 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC14.74□□□□□ -0.05
Sh3rf2Q8BZT2 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Sh3rf2Q8BZT2 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Sh3rf2Q8BZT2 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Sh3rf2Q8BZT2 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Sh3rf2Q8BZT2 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Sh3rf2Q8BZT2 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Sh3rf2Q8BZT2 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Sh3rf2Q8BZT2 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC14.73□□□□□ -0.05
Sh3rf2Q8BZT2 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Sh3rf2Q8BZT2 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Sh3rf2Q8BZT2 Syt7-204ENSMUST00000223586 1344 ntBASIC14.73□□□□□ -0.05
Sh3rf2Q8BZT2 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Sh3rf2Q8BZT2 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Sh3rf2Q8BZT2 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 56.2 ms