Protein–RNA interactions for Protein: Q8BT60

Cpne3, Copine-3, mousemouse

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne3Q8BT60 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cpne3Q8BT60 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cpne3Q8BT60 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cpne3Q8BT60 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cpne3Q8BT60 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cpne3Q8BT60 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC14.1□□□□□ -0.15
Cpne3Q8BT60 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cpne3Q8BT60 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cpne3Q8BT60 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC14.1□□□□□ -0.15
Cpne3Q8BT60 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cpne3Q8BT60 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cpne3Q8BT60 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC14.1□□□□□ -0.15
Cpne3Q8BT60 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Cpne3Q8BT60 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC14.1□□□□□ -0.15
Cpne3Q8BT60 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cpne3Q8BT60 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cpne3Q8BT60 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cpne3Q8BT60 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cpne3Q8BT60 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cpne3Q8BT60 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cpne3Q8BT60 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Cpne3Q8BT60 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Cpne3Q8BT60 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Cpne3Q8BT60 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cpne3Q8BT60 AC119177.1-201ENSMUST00000227647 1332 ntBASIC14.1□□□□□ -0.15
Cpne3Q8BT60 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
Cpne3Q8BT60 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC14.1□□□□□ -0.15
Cpne3Q8BT60 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Cpne3Q8BT60 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cpne3Q8BT60 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cpne3Q8BT60 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Cpne3Q8BT60 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cpne3Q8BT60 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cpne3Q8BT60 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cpne3Q8BT60 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC14.09□□□□□ -0.15
Cpne3Q8BT60 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cpne3Q8BT60 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cpne3Q8BT60 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
Cpne3Q8BT60 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Cpne3Q8BT60 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Cpne3Q8BT60 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Cpne3Q8BT60 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC14.09□□□□□ -0.15
Cpne3Q8BT60 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Cpne3Q8BT60 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC14.09□□□□□ -0.15
Cpne3Q8BT60 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC14.09□□□□□ -0.15
Cpne3Q8BT60 AC131709.1-201ENSMUST00000224731 1180 ntBASIC14.09□□□□□ -0.15
Cpne3Q8BT60 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Cpne3Q8BT60 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cpne3Q8BT60 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cpne3Q8BT60 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cpne3Q8BT60 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Cpne3Q8BT60 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
Cpne3Q8BT60 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Cpne3Q8BT60 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cpne3Q8BT60 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cpne3Q8BT60 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cpne3Q8BT60 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cpne3Q8BT60 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cpne3Q8BT60 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC14.08□□□□□ -0.15
Cpne3Q8BT60 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Cpne3Q8BT60 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Cpne3Q8BT60 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.15
Cpne3Q8BT60 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Cpne3Q8BT60 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Cpne3Q8BT60 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cpne3Q8BT60 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC14.08□□□□□ -0.16
Cpne3Q8BT60 Gm15593-201ENSMUST00000122085 1008 ntBASIC14.08□□□□□ -0.16
Cpne3Q8BT60 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cpne3Q8BT60 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cpne3Q8BT60 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Cpne3Q8BT60 Gm42670-201ENSMUST00000201816 1292 ntBASIC14.08□□□□□ -0.16
Cpne3Q8BT60 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cpne3Q8BT60 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC14.08□□□□□ -0.16
Cpne3Q8BT60 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC14.08□□□□□ -0.16
Cpne3Q8BT60 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cpne3Q8BT60 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cpne3Q8BT60 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC14.08□□□□□ -0.16
Cpne3Q8BT60 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cpne3Q8BT60 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Cpne3Q8BT60 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cpne3Q8BT60 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cpne3Q8BT60 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cpne3Q8BT60 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cpne3Q8BT60 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC14.07□□□□□ -0.16
Cpne3Q8BT60 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cpne3Q8BT60 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Cpne3Q8BT60 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC14.07□□□□□ -0.16
Cpne3Q8BT60 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cpne3Q8BT60 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cpne3Q8BT60 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cpne3Q8BT60 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Cpne3Q8BT60 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cpne3Q8BT60 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cpne3Q8BT60 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cpne3Q8BT60 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cpne3Q8BT60 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Cpne3Q8BT60 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cpne3Q8BT60 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Cpne3Q8BT60 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC14.07□□□□□ -0.16
Cpne3Q8BT60 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC14.07□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms