Protein–RNA interactions for Protein: Q8BSQ9

Pbrm1, Protein polybromo-1, mousemouse

Known RBP Predictions only

Length 1,634 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pbrm1Q8BSQ9 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC22.18■■□□□ 1.14
Pbrm1Q8BSQ9 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC22.18■■□□□ 1.14
Pbrm1Q8BSQ9 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Pbrm1Q8BSQ9 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Pbrm1Q8BSQ9 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Pbrm1Q8BSQ9 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC22.17■■□□□ 1.14
Pbrm1Q8BSQ9 Gm11618-201ENSMUST00000117946 267 ntBASIC22.17■■□□□ 1.14
Pbrm1Q8BSQ9 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC22.17■■□□□ 1.14
Pbrm1Q8BSQ9 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC22.17■■□□□ 1.14
Pbrm1Q8BSQ9 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC22.17■■□□□ 1.14
Pbrm1Q8BSQ9 Gm37497-201ENSMUST00000195830 798 ntBASIC22.17■■□□□ 1.14
Pbrm1Q8BSQ9 AC164573.1-201ENSMUST00000218616 963 ntTSL 5 BASIC22.17■■□□□ 1.14
Pbrm1Q8BSQ9 CT030704.2-201ENSMUST00000228887 494 ntBASIC22.17■■□□□ 1.14
Pbrm1Q8BSQ9 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC22.17■■□□□ 1.14
Pbrm1Q8BSQ9 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC22.17■■□□□ 1.14
Pbrm1Q8BSQ9 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC22.17■■□□□ 1.14
Pbrm1Q8BSQ9 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Pbrm1Q8BSQ9 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Pbrm1Q8BSQ9 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC22.17■■□□□ 1.14
Pbrm1Q8BSQ9 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC22.17■■□□□ 1.14
Pbrm1Q8BSQ9 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Pbrm1Q8BSQ9 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC22.17■■□□□ 1.14
Pbrm1Q8BSQ9 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC22.17■■□□□ 1.14
Pbrm1Q8BSQ9 Gm18753-201ENSMUST00000201000 566 ntBASIC22.17■■□□□ 1.14
Pbrm1Q8BSQ9 Itm2b-204ENSMUST00000228637 783 ntBASIC22.17■■□□□ 1.14
Pbrm1Q8BSQ9 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC22.17■■□□□ 1.14
Pbrm1Q8BSQ9 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC22.16■■□□□ 1.14
Pbrm1Q8BSQ9 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Pbrm1Q8BSQ9 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Pbrm1Q8BSQ9 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC22.16■■□□□ 1.14
Pbrm1Q8BSQ9 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Pbrm1Q8BSQ9 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC22.16■■□□□ 1.14
Pbrm1Q8BSQ9 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC22.16■■□□□ 1.14
Pbrm1Q8BSQ9 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC22.16■■□□□ 1.14
Pbrm1Q8BSQ9 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Pbrm1Q8BSQ9 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Pbrm1Q8BSQ9 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC22.16■■□□□ 1.14
Pbrm1Q8BSQ9 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC22.16■■□□□ 1.14
Pbrm1Q8BSQ9 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC22.16■■□□□ 1.14
Pbrm1Q8BSQ9 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC22.16■■□□□ 1.14
Pbrm1Q8BSQ9 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC22.16■■□□□ 1.14
Pbrm1Q8BSQ9 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC22.16■■□□□ 1.14
Pbrm1Q8BSQ9 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC22.16■■□□□ 1.14
Pbrm1Q8BSQ9 Gm17870-201ENSMUST00000219489 1174 ntBASIC22.16■■□□□ 1.14
Pbrm1Q8BSQ9 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Pbrm1Q8BSQ9 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Pbrm1Q8BSQ9 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC22.16■■□□□ 1.14
Pbrm1Q8BSQ9 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
Pbrm1Q8BSQ9 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Pbrm1Q8BSQ9 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC22.16■■□□□ 1.14
Pbrm1Q8BSQ9 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC22.16■■□□□ 1.14
Pbrm1Q8BSQ9 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Pbrm1Q8BSQ9 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
Pbrm1Q8BSQ9 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Pbrm1Q8BSQ9 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Pbrm1Q8BSQ9 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC22.15■■□□□ 1.14
Pbrm1Q8BSQ9 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Pbrm1Q8BSQ9 Gm12176-201ENSMUST00000121420 875 ntBASIC22.15■■□□□ 1.14
Pbrm1Q8BSQ9 Gm38158-201ENSMUST00000194617 339 ntBASIC22.15■■□□□ 1.14
Pbrm1Q8BSQ9 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
Pbrm1Q8BSQ9 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Pbrm1Q8BSQ9 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Pbrm1Q8BSQ9 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC22.15■■□□□ 1.14
Pbrm1Q8BSQ9 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC22.14■■□□□ 1.14
Pbrm1Q8BSQ9 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
Pbrm1Q8BSQ9 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC22.14■■□□□ 1.14
Pbrm1Q8BSQ9 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC22.14■■□□□ 1.14
Pbrm1Q8BSQ9 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
Pbrm1Q8BSQ9 Gm6621-201ENSMUST00000193251 772 ntBASIC22.14■■□□□ 1.14
Pbrm1Q8BSQ9 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
Pbrm1Q8BSQ9 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC22.14■■□□□ 1.13
Pbrm1Q8BSQ9 Gm15544-201ENSMUST00000118776 1531 ntBASIC22.14■■□□□ 1.13
Pbrm1Q8BSQ9 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC22.14■■□□□ 1.13
Pbrm1Q8BSQ9 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Pbrm1Q8BSQ9 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.13
Pbrm1Q8BSQ9 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Pbrm1Q8BSQ9 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC22.14■■□□□ 1.13
Pbrm1Q8BSQ9 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
Pbrm1Q8BSQ9 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC22.14■■□□□ 1.13
Pbrm1Q8BSQ9 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC22.13■■□□□ 1.13
Pbrm1Q8BSQ9 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
Pbrm1Q8BSQ9 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Pbrm1Q8BSQ9 Gm7046-201ENSMUST00000221351 977 ntBASIC22.13■■□□□ 1.13
Pbrm1Q8BSQ9 CT573034.1-201ENSMUST00000222983 313 ntBASIC22.13■■□□□ 1.13
Pbrm1Q8BSQ9 Gm2824-203ENSMUST00000226189 1228 ntBASIC22.13■■□□□ 1.13
Pbrm1Q8BSQ9 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
Pbrm1Q8BSQ9 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Pbrm1Q8BSQ9 Gm24447-201ENSMUST00000083977 338 ntBASIC22.13■■□□□ 1.13
Pbrm1Q8BSQ9 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Pbrm1Q8BSQ9 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Pbrm1Q8BSQ9 Gm14451-201ENSMUST00000121581 1542 ntBASIC22.13■■□□□ 1.13
Pbrm1Q8BSQ9 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC22.13■■□□□ 1.13
Pbrm1Q8BSQ9 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Pbrm1Q8BSQ9 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Pbrm1Q8BSQ9 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC22.13■■□□□ 1.13
Pbrm1Q8BSQ9 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Pbrm1Q8BSQ9 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Pbrm1Q8BSQ9 Gm15770-201ENSMUST00000117498 584 ntBASIC22.13■■□□□ 1.13
Pbrm1Q8BSQ9 Gm13123-201ENSMUST00000122173 492 ntBASIC22.13■■□□□ 1.13
Pbrm1Q8BSQ9 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC22.13■■□□□ 1.13
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms