Protein–RNA interactions for Protein: Q8BRF7

Scfd1, Sec1 family domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scfd1Q8BRF7 Gm5763-201ENSMUST00000155951 1530 ntBASIC16.61■□□□□ 0.25
Scfd1Q8BRF7 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Scfd1Q8BRF7 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Scfd1Q8BRF7 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Scfd1Q8BRF7 Gm14042-201ENSMUST00000120139 833 ntBASIC16.61■□□□□ 0.25
Scfd1Q8BRF7 Gm7820-201ENSMUST00000121012 1052 ntBASIC16.61■□□□□ 0.25
Scfd1Q8BRF7 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Scfd1Q8BRF7 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
Scfd1Q8BRF7 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Scfd1Q8BRF7 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Scfd1Q8BRF7 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Scfd1Q8BRF7 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Scfd1Q8BRF7 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Scfd1Q8BRF7 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Scfd1Q8BRF7 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Scfd1Q8BRF7 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Scfd1Q8BRF7 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Scfd1Q8BRF7 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Scfd1Q8BRF7 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Scfd1Q8BRF7 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Scfd1Q8BRF7 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC16.61■□□□□ 0.25
Scfd1Q8BRF7 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Scfd1Q8BRF7 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Scfd1Q8BRF7 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Scfd1Q8BRF7 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC16.61■□□□□ 0.25
Scfd1Q8BRF7 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Scfd1Q8BRF7 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Scfd1Q8BRF7 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Scfd1Q8BRF7 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Scfd1Q8BRF7 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC16.6■□□□□ 0.25
Scfd1Q8BRF7 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Scfd1Q8BRF7 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Scfd1Q8BRF7 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Scfd1Q8BRF7 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Scfd1Q8BRF7 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Scfd1Q8BRF7 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
Scfd1Q8BRF7 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Scfd1Q8BRF7 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC16.6■□□□□ 0.25
Scfd1Q8BRF7 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Scfd1Q8BRF7 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC16.6■□□□□ 0.25
Scfd1Q8BRF7 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Scfd1Q8BRF7 Gm6916-202ENSMUST00000205523 195 ntBASIC16.6■□□□□ 0.25
Scfd1Q8BRF7 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Scfd1Q8BRF7 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Scfd1Q8BRF7 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Scfd1Q8BRF7 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Scfd1Q8BRF7 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Scfd1Q8BRF7 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Scfd1Q8BRF7 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Scfd1Q8BRF7 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Scfd1Q8BRF7 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC16.6■□□□□ 0.25
Scfd1Q8BRF7 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC16.6■□□□□ 0.25
Scfd1Q8BRF7 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Scfd1Q8BRF7 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Scfd1Q8BRF7 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Scfd1Q8BRF7 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Scfd1Q8BRF7 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC16.6■□□□□ 0.25
Scfd1Q8BRF7 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Scfd1Q8BRF7 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Scfd1Q8BRF7 Gm37305-201ENSMUST00000195714 4279 ntBASIC16.59■□□□□ 0.25
Scfd1Q8BRF7 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Scfd1Q8BRF7 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Scfd1Q8BRF7 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC16.59■□□□□ 0.25
Scfd1Q8BRF7 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Scfd1Q8BRF7 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Scfd1Q8BRF7 Gm5357-201ENSMUST00000212720 1924 ntBASIC16.59■□□□□ 0.25
Scfd1Q8BRF7 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Scfd1Q8BRF7 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Scfd1Q8BRF7 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Scfd1Q8BRF7 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Scfd1Q8BRF7 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC16.59■□□□□ 0.25
Scfd1Q8BRF7 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC16.59■□□□□ 0.25
Scfd1Q8BRF7 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC16.59■□□□□ 0.25
Scfd1Q8BRF7 Gm20445-201ENSMUST00000061905 565 ntBASIC16.59■□□□□ 0.25
Scfd1Q8BRF7 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Scfd1Q8BRF7 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Scfd1Q8BRF7 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Scfd1Q8BRF7 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Scfd1Q8BRF7 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Scfd1Q8BRF7 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Scfd1Q8BRF7 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Scfd1Q8BRF7 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC16.58■□□□□ 0.25
Scfd1Q8BRF7 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
Scfd1Q8BRF7 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
Scfd1Q8BRF7 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Scfd1Q8BRF7 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Scfd1Q8BRF7 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC16.58■□□□□ 0.24
Scfd1Q8BRF7 Gm12882-201ENSMUST00000121696 517 ntBASIC16.58■□□□□ 0.24
Scfd1Q8BRF7 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC16.58■□□□□ 0.24
Scfd1Q8BRF7 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Scfd1Q8BRF7 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC16.58■□□□□ 0.24
Scfd1Q8BRF7 AC135669.1-201ENSMUST00000213585 412 ntBASIC16.58■□□□□ 0.24
Scfd1Q8BRF7 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Scfd1Q8BRF7 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Scfd1Q8BRF7 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Scfd1Q8BRF7 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Scfd1Q8BRF7 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Scfd1Q8BRF7 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Scfd1Q8BRF7 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Scfd1Q8BRF7 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 47.1 ms